Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ABCC13-202ENST00000463099 3842 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 RN7SL547P-201ENST00000490793 290 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 OR8G3P-201ENST00000533406 921 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 OR11H3P-201ENST00000554547 982 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 SUGT1P3-202ENST00000604259 383 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 uc_338.7-201ENST00000621834 124 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AC135068.5-201ENST00000624197 983 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AL049767.1-202ENST00000637826 242 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 AC100757.1-201ENST00000616872 1835 ntBASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.53□□□□□ -1.68
GAFA1Q96PS6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AL121839.2-201ENST00000565058 6943 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 MIR133B-201ENST00000362210 119 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 RNA5SP132-201ENST00000364725 118 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 U3.25-201ENST00000391209 220 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 DBIP1-201ENST00000401435 260 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AL133388.1-201ENST00000404509 287 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AL121776.1-201ENST00000429337 372 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 MTND2P40-201ENST00000436718 841 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC092754.1-201ENST00000472975 479 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 RN7SL184P-201ENST00000488308 297 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC106872.4-201ENST00000510050 523 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 SCARNA20.4-201ENST00000516969 131 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AP004607.2-201ENST00000533949 322 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 BLZF2P-201ENST00000553776 1130 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC007204.2-201ENST00000615022 616 ntBASIC4.52□□□□□ -1.69
GAFA1Q96PS6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
GAFA1Q96PS6 Z95114.1-201ENST00000624264 14574 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 AC016745.2-201ENST00000608834 3443 ntBASIC4.51□□□□□ -1.69
GAFA1Q96PS6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GAFA1Q96PS6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms