Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC022893.2-201ENST00000564832 3296 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AL035419.1-201ENST00000397037 564 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 RN7SKP126-201ENST00000411143 300 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 CEACAMP9-201ENST00000442990 513 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC092647.3-201ENST00000443044 633 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC134349.2-201ENST00000535136 910 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SNED1Q8TER0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 AC012618.3-205ENST00000637896 1496 ntBASIC6.64□□□□□ -1.35
SNED1Q8TER0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNED1Q8TER0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 AL078599.1-201ENST00000402075 293 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 AL009179.1-201ENST00000406085 265 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 AL590139.1-201ENST00000416267 400 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 RPL6P21-201ENST00000418672 846 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 EI24P4-201ENST00000423683 1078 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 GSTA7P-201ENST00000438425 448 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 RPL31P44-201ENST00000447680 377 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 snoU109.5-201ENST00000516231 132 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 AP002373.2-201ENST00000541631 1060 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 BNIP3P1-201ENST00000547295 580 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 MIR3934-201ENST00000579806 107 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 AF230666.2-201ENST00000602328 725 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 HIRAP1-201ENST00000605318 787 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNED1Q8TER0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 MT-RNR2-201ENST00000387347 1559 ntBASIC6.63□□□□□ -1.35
SNED1Q8TER0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SNED1Q8TER0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 Z92846.1-201ENST00000456203 268 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 RPS17P5-201ENST00000498293 408 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 PMS2P3-207ENST00000529061 717 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 AC060766.1-201ENST00000590824 627 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 AC008745.1-201ENST00000604064 271 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 ZNF969P-201ENST00000510345 2341 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNED1Q8TER0 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
SNED1Q8TER0 AC083899.1-201ENST00000454465 3819 ntBASIC6.62□□□□□ -1.35
SNED1Q8TER0 AC007998.4-201ENST00000612496 2533 ntBASIC6.61□□□□□ -1.35
SNED1Q8TER0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SNED1Q8TER0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms