Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 Y_RNA.51-201ENST00000362725 102 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL590762.1-201ENST00000391782 432 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL590290.1-201ENST00000405336 380 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MIR1303-201ENST00000408625 86 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 RN7SKP129-201ENST00000410288 299 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 GSTA6P-201ENST00000424144 582 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MTND1P4-201ENST00000435196 415 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC092106.2-201ENST00000436597 487 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 RPS26P30-201ENST00000443431 335 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MTCYBP3-201ENST00000445588 1137 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 PFN1P11-201ENST00000445829 389 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 OR7A15P-201ENST00000449848 1009 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL935212.3-201ENST00000450729 284 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 PFN1P8-201ENST00000497012 543 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC091849.1-201ENST00000509920 121 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC010587.2-201ENST00000511727 448 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC008837.2-201ENST00000513076 418 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 CYP4F27P-201ENST00000514557 494 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC104073.3-201ENST00000610942 955 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC004223.4-201ENST00000612426 332 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MIR6778-201ENST00000617912 73 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC021106.3-201ENST00000623925 531 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL603839.4-201ENST00000624658 1005 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC005609.4-201ENST00000625071 447 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AC092192.1-201ENST00000633154 1018 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AL354702.2-202ENST00000641481 890 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 VPS35P1-201ENST00000563400 1518 ntBASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
NPAS4Q8IUM7 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AL353743.3-201ENST00000442109 1468 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 Z99496.1-201ENST00000469424 1477 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 MTND4P31-201ENST00000425607 1343 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 IL6STP1-201ENST00000346911 1020 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 RN7SKP62-201ENST00000384539 329 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 MIR137-201ENST00000385223 102 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 HMGB3P7-201ENST00000400214 611 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AC129850.1-201ENST00000436203 508 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 ARMC4P1-201ENST00000438905 707 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AL591503.2-201ENST00000442314 1005 ntBASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.36□□□□□ -1.23
NPAS4Q8IUM7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms