Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UBA52P62987 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
UBA52P62987 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
UBA52P62987 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
UBA52P62987 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
UBA52P62987 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.9□□□□□ -1.62
UBA52P62987 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.9□□□□□ -1.62
UBA52P62987 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
UBA52P62987 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
UBA52P62987 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.9□□□□□ -1.62
UBA52P62987 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UBA52P62987 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 RPS3AP2-201ENST00000407190 754 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AL133482.1-201ENST00000415988 498 ntBASIC4.9□□□□□ -1.63
UBA52P62987 BMS1P13-201ENST00000417301 885 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AL512637.1-201ENST00000439523 1231 ntBASIC4.9□□□□□ -1.63
UBA52P62987 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.9□□□□□ -1.63
UBA52P62987 BMS1P10-201ENST00000443754 1120 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 MYO5BP2-201ENST00000449815 1277 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 RPS27AP2-201ENST00000457576 465 ntBASIC4.9□□□□□ -1.63
UBA52P62987 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 RPS26P39-201ENST00000469206 341 ntBASIC4.9□□□□□ -1.63
UBA52P62987 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 AL122020.1-201ENST00000472287 459 ntBASIC4.9□□□□□ -1.63
UBA52P62987 CCDC11P1-201ENST00000503137 1162 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
UBA52P62987 GAPDHP62-201ENST00000515313 990 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AP000648.1-201ENST00000529682 397 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC090424.1-201ENST00000535243 736 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AC091078.2-201ENST00000557145 559 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.9□□□□□ -1.63
UBA52P62987 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UBA52P62987 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 MIR3176-201ENST00000582210 90 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.9□□□□□ -1.63
UBA52P62987 AL031601.1-201ENST00000605702 394 ntBASIC4.9□□□□□ -1.63
UBA52P62987 AL645933.2-201ENST00000606743 1207 ntBASIC4.9□□□□□ -1.63
UBA52P62987 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 SAMMSON-227ENST00000642114 1199 ntBASIC4.9□□□□□ -1.63
UBA52P62987 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UBA52P62987 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
UBA52P62987 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UBA52P62987 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.63
UBA52P62987 NEPNP-201ENST00000404786 1371 ntBASIC4.9□□□□□ -1.63
UBA52P62987 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 AC130304.1-201ENST00000622942 2385 ntBASIC4.9□□□□□ -1.63
UBA52P62987 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
UBA52P62987 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 RBPJP7-201ENST00000442803 1447 ntBASIC4.89□□□□□ -1.63
UBA52P62987 RBPJP5-201ENST00000449433 1447 ntBASIC4.89□□□□□ -1.63
UBA52P62987 AC027279.1-201ENST00000568885 4284 ntBASIC4.89□□□□□ -1.63
UBA52P62987 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 OR13C1P-202ENST00000641378 2919 ntBASIC4.89□□□□□ -1.63
UBA52P62987 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
UBA52P62987 RNU1-150P-201ENST00000362491 162 ntBASIC4.89□□□□□ -1.63
UBA52P62987 MYL6P5-201ENST00000412707 459 ntBASIC4.89□□□□□ -1.63
UBA52P62987 BX510359.3-201ENST00000422168 306 ntBASIC4.89□□□□□ -1.63
UBA52P62987 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.89□□□□□ -1.63
UBA52P62987 BX323845.3-201ENST00000428215 527 ntBASIC4.89□□□□□ -1.63
UBA52P62987 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.89□□□□□ -1.63
UBA52P62987 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 ACA64.4-201ENST00000459070 127 ntBASIC4.89□□□□□ -1.63
UBA52P62987 AC026348.1-201ENST00000462549 1053 ntBASIC4.89□□□□□ -1.63
UBA52P62987 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.89□□□□□ -1.63
UBA52P62987 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.89□□□□□ -1.63
UBA52P62987 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.89□□□□□ -1.63
UBA52P62987 AC008638.1-201ENST00000506035 866 ntBASIC4.89□□□□□ -1.63
UBA52P62987 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBA52P62987 ATP5LP3-201ENST00000514223 304 ntBASIC4.89□□□□□ -1.63
UBA52P62987 IGLV3-24-201ENST00000517477 197 ntBASIC4.89□□□□□ -1.63
UBA52P62987 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.89□□□□□ -1.63
UBA52P62987 AL121594.2-201ENST00000541658 472 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms