Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OLMALINC-203ENST00000641087 3779 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC097461.1-201ENST00000568928 2821 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 MTND4LP7-201ENST00000431728 294 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.94□□□□□ -1.3
RHBDL3P58872 MTND2P21-201ENST00000436242 1042 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC023141.8-201ENST00000442554 208 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC005297.1-201ENST00000444765 862 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.94□□□□□ -1.3
RHBDL3P58872 RPL32P33-201ENST00000487023 394 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC008429.4-201ENST00000521201 182 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 MTND2P7-201ENST00000521337 640 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.94□□□□□ -1.3
RHBDL3P58872 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 MIR1273E-201ENST00000581165 102 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 AC063977.5-201ENST00000601044 974 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 MIR6826-201ENST00000617808 98 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 SRRM1P3-201ENST00000426911 2678 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.94□□□□□ -1.3
RHBDL3P58872 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 UGT2B26P-201ENST00000508672 1613 ntBASIC6.94□□□□□ -1.3
RHBDL3P58872 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RHBDL3P58872 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.93□□□□□ -1.3
RHBDL3P58872 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 AL121950.1-201ENST00000624993 2077 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 MTCO1P15-201ENST00000529569 1526 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 SNORD115-48-201ENST00000364764 76 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.93□□□□□ -1.3
RHBDL3P58872 RPL26P37-201ENST00000411983 438 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 RPS26P4-201ENST00000431743 355 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC093716.1-201ENST00000435923 377 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.93□□□□□ -1.3
RHBDL3P58872 SEPT7P3-201ENST00000455017 621 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AC074386.1-201ENST00000476560 767 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 RPS3AP15-201ENST00000483874 781 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 OR7E157P-201ENST00000494376 911 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC023818.1-201ENST00000498379 384 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.93□□□□□ -1.3
RHBDL3P58872 HMGB1P3-201ENST00000502802 616 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 DUTP7-201ENST00000507982 486 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 SETP12-201ENST00000514068 805 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 RN7SKP288-201ENST00000516227 268 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC021678.3-201ENST00000517893 476 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 IGKV2-19-201ENST00000518132 283 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AP003080.1-202ENST00000526526 915 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AP000619.2-201ENST00000546014 969 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AC096996.1-201ENST00000563813 325 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AC068020.1-201ENST00000594215 661 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AC130352.1-201ENST00000602979 661 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AL096803.3-201ENST00000609032 532 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
RHBDL3P58872 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AL356490.1-201ENST00000623079 479 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 AL691477.1-201ENST00000624398 162 ntBASIC6.93□□□□□ -1.3
RHBDL3P58872 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.93□□□□□ -1.3
RHBDL3P58872 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.93□□□□□ -1.3
RHBDL3P58872 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.93□□□□□ -1.3
RHBDL3P58872 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RHBDL3P58872 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms