Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC112243.1-201ENST00000623949 3851 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 ZNF658B-201ENST00000602828 3408 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 SNORA70H-201ENST00000383910 135 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 SNORA70J-201ENST00000384182 135 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 MIR191-201ENST00000384873 92 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC003045.1-201ENST00000398779 713 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AL139805.1-201ENST00000407837 289 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC013404.1-201ENST00000413068 249 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 HMGA1P8-201ENST00000414130 321 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 HIGD1AP15-201ENST00000416198 280 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 MTND4P3-201ENST00000417829 541 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 AC112492.2-201ENST00000432774 1030 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 PTGES3P1-201ENST00000439531 483 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC007383.1-201ENST00000445875 636 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 AL050341.1-201ENST00000447743 313 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC092967.1-201ENST00000449016 481 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.74□□□□□ -1.49
SUMO3P55854 METTL15P1-201ENST00000481421 1045 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 RPS12P31-201ENST00000491419 398 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 OR4D12P-201ENST00000509361 911 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 HMGB1P1-201ENST00000522557 636 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC006518.2-201ENST00000542513 940 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 LRRC34P1-201ENST00000542742 915 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.74□□□□□ -1.49
SUMO3P55854 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.74□□□□□ -1.49
SUMO3P55854 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 RN7SL475P-201ENST00000583379 298 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC006924.1-201ENST00000610750 559 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC009464.1-201ENST00000615731 469 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AC009159.2-201ENST00000617603 606 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SUMO3P55854 AP000676.4-201ENST00000624659 623 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AL357140.4-201ENST00000636827 412 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 AP000550.3-201ENST00000637734 379 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SUMO3P55854 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 AC018628.1-201ENST00000624147 3819 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.74□□□□□ -1.49
SUMO3P55854 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.74□□□□□ -1.49
SUMO3P55854 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 AL133268.1-201ENST00000405676 1401 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 GUCY1B2-204ENST00000531898 1979 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 AC006511.3-201ENST00000624929 1783 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.73□□□□□ -1.49
SUMO3P55854 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SUMO3P55854 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SUMO3P55854 RNU6-906P-201ENST00000384700 70 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 AF228730.1-201ENST00000397972 663 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.73□□□□□ -1.49
SUMO3P55854 AP002530.1-201ENST00000405705 684 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 PCNPP4-201ENST00000414817 517 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.73□□□□□ -1.49
SUMO3P55854 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.73□□□□□ -1.49
SUMO3P55854 AL449283.1-202ENST00000418249 604 ntBASIC5.73□□□□□ -1.49
SUMO3P55854 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms