Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH13P55290 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.57□□□□□ -1.52
CDH13P55290 MIR1275-201ENST00000408770 80 ntBASIC5.57□□□□□ -1.52
CDH13P55290 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 OR10T1P-201ENST00000424327 947 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 RPS27AP6-201ENST00000427962 448 ntBASIC5.57□□□□□ -1.52
CDH13P55290 TIMM8BP2-201ENST00000445940 251 ntBASIC5.57□□□□□ -1.52
CDH13P55290 CFL1P4-201ENST00000451536 498 ntBASIC5.57□□□□□ -1.52
CDH13P55290 TAAR4P-201ENST00000454843 1039 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 AC104339.1-201ENST00000465478 348 ntBASIC5.57□□□□□ -1.52
CDH13P55290 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 STRADBP1-201ENST00000478954 1281 ntBASIC5.57□□□□□ -1.52
CDH13P55290 RBBP4P1-201ENST00000502424 1276 ntBASIC5.57□□□□□ -1.52
CDH13P55290 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 GAPDHP71-201ENST00000511530 1003 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH13P55290 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 PCNAP4-201ENST00000532690 730 ntBASIC5.57□□□□□ -1.52
CDH13P55290 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.57□□□□□ -1.52
CDH13P55290 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 MIR3154-201ENST00000577829 84 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH13P55290 OR51C1P-201ENST00000608504 942 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AL592494.3-201ENST00000609485 464 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 AC015922.4-201ENST00000612568 690 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AC104307.1-201ENST00000616142 196 ntBASIC5.57□□□□□ -1.52
CDH13P55290 AC090181.3-201ENST00000624777 1514 ntBASIC5.57□□□□□ -1.52
CDH13P55290 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDH13P55290 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CDH13P55290 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH13P55290 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDH13P55290 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 AL034546.1-201ENST00000623740 3693 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.56□□□□□ -1.52
CDH13P55290 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH13P55290 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 AC005042.1-201ENST00000393397 800 ntBASIC5.56□□□□□ -1.52
CDH13P55290 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH13P55290 NIFKP3-201ENST00000417799 865 ntBASIC5.56□□□□□ -1.52
CDH13P55290 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH13P55290 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.56□□□□□ -1.52
CDH13P55290 PRUNEP1-201ENST00000425846 705 ntBASIC5.56□□□□□ -1.52
CDH13P55290 MTCO1P45-201ENST00000431457 267 ntBASIC5.56□□□□□ -1.52
CDH13P55290 MTND2P40-201ENST00000436718 841 ntBASIC5.56□□□□□ -1.52
CDH13P55290 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 VN1R110P-201ENST00000438988 971 ntBASIC5.56□□□□□ -1.52
CDH13P55290 PPIAP27-201ENST00000453800 265 ntBASIC5.56□□□□□ -1.52
CDH13P55290 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
CDH13P55290 SUMO2P4-201ENST00000504193 276 ntBASIC5.56□□□□□ -1.52
CDH13P55290 RNU6-760P-201ENST00000516078 97 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH13P55290 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH13P55290 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH13P55290 AP003396.4-201ENST00000527574 265 ntBASIC5.56□□□□□ -1.52
CDH13P55290 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH13P55290 AL356801.1-201ENST00000559320 294 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AC012414.2-201ENST00000559474 187 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AP001437.1-201ENST00000608783 456 ntBASIC5.56□□□□□ -1.52
CDH13P55290 MIR6793-201ENST00000612376 63 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AC244100.4-201ENST00000617747 388 ntBASIC5.56□□□□□ -1.52
CDH13P55290 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH13P55290 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDH13P55290 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH13P55290 PDZK1P1-202ENST00000425209 1350 ntBASIC5.55□□□□□ -1.52
CDH13P55290 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH13P55290 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH13P55290 LYARP1-201ENST00000436977 1501 ntBASIC5.55□□□□□ -1.52
CDH13P55290 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH13P55290 COX6B1P3-201ENST00000312310 260 ntBASIC5.55□□□□□ -1.52
CDH13P55290 TMSB4XP2-201ENST00000335179 210 ntBASIC5.55□□□□□ -1.52
CDH13P55290 RNA5SP500-201ENST00000364486 119 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms