Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC008555.7-201ENST00000605008 583 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AC067931.1-201ENST00000624190 671 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC138627.1-204ENST00000641894 765 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC092435.4-201ENST00000623012 4159 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AL359715.3-201ENST00000569267 2123 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF2A1P52655 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
GTF2A1P52655 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC091046.3-201ENST00000631455 1574 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AC010894.1-201ENST00000313760 361 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 RN7SKP205-201ENST00000410999 307 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AL139135.1-201ENST00000412675 209 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 SOCS5P1-201ENST00000440415 949 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AL512593.1-201ENST00000444758 779 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 POU5F1P5-201ENST00000445059 658 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AC073109.1-201ENST00000445066 978 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 PFN1P6-201ENST00000476786 399 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 RPL12P31-201ENST00000478433 450 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 RN7SL413P-201ENST00000482700 297 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 GM2AP2-201ENST00000491764 562 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 RN7SL350P-201ENST00000492591 299 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 STMN1P2-201ENST00000508435 439 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 OR4D12P-201ENST00000509361 911 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC097505.1-201ENST00000610199 565 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AL589743.6-201ENST00000611025 117 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF2A1P52655 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
GTF2A1P52655 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF2A1P52655 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF2A1P52655 OR4F13P-202ENST00000560066 2054 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AP000542.2-201ENST00000623199 6179 ntBASIC5.35□□□□□ -1.55
GTF2A1P52655 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.35□□□□□ -1.55
GTF2A1P52655 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC079248.1-201ENST00000427568 1546 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC011503.2-201ENST00000594230 1500 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF2A1P52655 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
GTF2A1P52655 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF2A1P52655 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GTF2A1P52655 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC003045.1-201ENST00000398779 713 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AL139100.1-201ENST00000408001 498 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 RNA5SP155-201ENST00000411154 129 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AL160275.2-201ENST00000412010 394 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC009237.10-201ENST00000414112 510 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC006509.1-201ENST00000420788 634 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 AC002127.1-201ENST00000421305 225 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 FAM183DP-201ENST00000421987 399 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AC112492.2-201ENST00000432774 1030 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF2A1P52655 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF2A1P52655 COX4I1P2-201ENST00000447446 547 ntBASIC5.34□□□□□ -1.55
GTF2A1P52655 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms