Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC013470.3-201ENST00000420252 1194 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 RPL34P3-201ENST00000421454 338 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AC019205.1-201ENST00000421830 730 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 REREP1Y-201ENST00000422655 198 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 REREP2Y-201ENST00000439103 200 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 RNU1-88P-201ENST00000459274 128 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCNKAP51800 ASNSP4-201ENST00000511103 447 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 CYCSP22-201ENST00000517555 339 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 IGLVIV-64-201ENST00000518581 301 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AC126615.2-201ENST00000553003 515 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AL163952.1-202ENST00000569625 600 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 AC096586.2-201ENST00000610260 441 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 RN7SL544P-201ENST00000617232 284 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.71□□□□□ -1.5
CLCNKAP51800 RN7SL763P-201ENST00000620922 284 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AC022919.1-201ENST00000624979 626 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCNKAP51800 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCNKAP51800 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCNKAP51800 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLCNKAP51800 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 LINC01963-201ENST00000562038 3148 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 AL161912.4-201ENST00000623889 2468 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC093671.1-201ENST00000624981 2929 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 AP004607.3-201ENST00000530354 3915 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLCNKAP51800 RN7SKP269-201ENST00000365545 319 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC092642.1-201ENST00000392417 425 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCNKAP51800 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC234781.4-201ENST00000419384 244 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 MRPS21P2-201ENST00000424704 264 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 RPS6P14-201ENST00000425165 719 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 NDUFA5P1-201ENST00000433858 341 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 AL161636.2-201ENST00000445179 927 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 THAP12P8-201ENST00000447914 2115 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 LRRC37A14P-201ENST00000452297 462 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCNKAP51800 SETP20-201ENST00000457046 852 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 TRBV5-2-201ENST00000489095 273 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 ATG10-AS1-201ENST00000504846 648 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC074255.1-201ENST00000511259 501 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCNKAP51800 RNU6-943P-201ENST00000516960 98 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCNKAP51800 MTND1P36-201ENST00000522384 936 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC010547.6-201ENST00000571789 193 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC015802.5-201ENST00000607478 399 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 AL391262.2-201ENST00000622466 494 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 MIR193BHG-214ENST00000641765 509 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCNKAP51800 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLCNKAP51800 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms