Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL512652.1-201ENST00000619006 500 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DMAP28067 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 Z83820.1-201ENST00000456978 1499 ntBASIC4.81□□□□□ -1.64
HLA-DMAP28067 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DMAP28067 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 RBPJP2-201ENST00000618187 1444 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC093775.1-201ENST00000624154 1868 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 RN7SKP28-201ENST00000364770 305 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 MIR27A-201ENST00000385073 78 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 MRPL53P1-201ENST00000414323 319 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 THEM7P-201ENST00000419556 672 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC019205.1-201ENST00000421830 730 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 RIMKLBP2-201ENST00000424737 654 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AL031681.1-201ENST00000443304 400 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC239798.3-201ENST00000454459 408 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC019084.1-201ENST00000457337 432 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC021106.1-201ENST00000509020 1058 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 IMPA1P1-201ENST00000510718 842 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 ZNF519P4-201ENST00000514008 125 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 RN7SKP5-201ENST00000517045 272 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC084759.1-201ENST00000561168 290 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 MRPL45P2-203ENST00000573318 473 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC073333.2-201ENST00000603589 769 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 AC089999.3-201ENST00000622440 577 ntBASIC4.8□□□□□ -1.64
HLA-DMAP28067 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DMAP28067 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DMAP28067 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC100757.1-201ENST00000616872 1835 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AL080312.1-201ENST00000256654 824 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 MIR130A-201ENST00000385274 89 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 PPIAP9-201ENST00000403866 498 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC013268.2-201ENST00000420753 337 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC092646.1-201ENST00000427142 901 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC092447.2-201ENST00000435487 669 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 NXT1P1-201ENST00000458481 316 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC063955.1-201ENST00000462872 685 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 RPS7P10-201ENST00000464254 603 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 RN7SL269P-201ENST00000467795 305 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 RN7SL267P-201ENST00000485107 261 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC134698.1-201ENST00000511619 643 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DMAP28067 CDC42P3-201ENST00000518493 633 ntBASIC4.79□□□□□ -1.64
HLA-DMAP28067 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms