Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 AC005005.4-201ENST00000623789 16698 ntBASIC4.83□□□□□ -1.64
ATF1P18846 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATF1P18846 GAPDHP24-201ENST00000328713 983 ntBASIC4.83□□□□□ -1.64
ATF1P18846 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATF1P18846 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 RNA5SP273-201ENST00000362484 113 ntBASIC4.83□□□□□ -1.64
ATF1P18846 RNA5SP30-201ENST00000365552 115 ntBASIC4.83□□□□□ -1.64
ATF1P18846 SNORD56.6-201ENST00000384569 71 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.83□□□□□ -1.64
ATF1P18846 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF1P18846 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.83□□□□□ -1.64
ATF1P18846 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF1P18846 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF1P18846 PRPF38AP1-201ENST00000451976 933 ntBASIC4.83□□□□□ -1.64
ATF1P18846 RPSAP37-201ENST00000470913 821 ntBASIC4.83□□□□□ -1.64
ATF1P18846 COX6B1P2-201ENST00000489624 230 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
ATF1P18846 IGBP1P4-201ENST00000503202 879 ntBASIC4.83□□□□□ -1.64
ATF1P18846 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.83□□□□□ -1.64
ATF1P18846 DUTP7-201ENST00000507982 486 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.83□□□□□ -1.64
ATF1P18846 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF1P18846 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATF1P18846 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.83□□□□□ -1.64
ATF1P18846 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 AC040958.1-201ENST00000561102 201 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 H3F3BP2-201ENST00000583907 357 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 MIR6806-201ENST00000622141 64 ntBASIC4.83□□□□□ -1.64
ATF1P18846 AL683826.1-201ENST00000624104 627 ntBASIC4.83□□□□□ -1.64
ATF1P18846 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ATF1P18846 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATF1P18846 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.83□□□□□ -1.64
ATF1P18846 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 Z83820.1-201ENST00000456978 1499 ntBASIC4.82□□□□□ -1.64
ATF1P18846 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF1P18846 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF1P18846 TMSB4XP2-201ENST00000335179 210 ntBASIC4.82□□□□□ -1.64
ATF1P18846 RNA5SP477-201ENST00000362639 119 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC007618.1-201ENST00000366455 732 ntBASIC4.82□□□□□ -1.64
ATF1P18846 OR1L6-202ENST00000373684 1044 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AL009179.1-201ENST00000406085 265 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 COX5BP7-201ENST00000414780 274 ntBASIC4.82□□□□□ -1.64
ATF1P18846 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 NENFP1-201ENST00000419476 466 ntBASIC4.82□□□□□ -1.64
ATF1P18846 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.82□□□□□ -1.64
ATF1P18846 HSPD1P12-201ENST00000429127 1069 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 AC007679.3-201ENST00000434035 414 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 AC118758.1-202ENST00000454719 225 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC104339.1-201ENST00000465478 348 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 AC122718.2-201ENST00000505325 591 ntBASIC4.82□□□□□ -1.64
ATF1P18846 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 Y_RNA.667-201ENST00000516212 107 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 AC027369.5-201ENST00000533838 755 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.82□□□□□ -1.64
ATF1P18846 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 HSPE1P2-201ENST00000554777 306 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.82□□□□□ -1.64
ATF1P18846 AC127024.5-201ENST00000580085 462 ntBASIC4.82□□□□□ -1.64
ATF1P18846 PRPF19P1-201ENST00000584766 898 ntBASIC4.82□□□□□ -1.64
ATF1P18846 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.82□□□□□ -1.64
ATF1P18846 AC063977.5-201ENST00000601044 974 ntBASIC4.82□□□□□ -1.64
ATF1P18846 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
ATF1P18846 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF1P18846 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATF1P18846 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ATF1P18846 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATF1P18846 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATF1P18846 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF1P18846 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ATF1P18846 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms