Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC087672.1-201ENST00000479876 766 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 SNORD46.2-201ENST00000516021 102 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 RNU6-615P-201ENST00000516065 106 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC2P18074 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC2P18074 AP004609.2-201ENST00000532177 190 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC2P18074 AC008833.1-201ENST00000611633 691 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC2P18074 AL390318.1-201ENST00000624564 687 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC2P18074 SRRM1P3-201ENST00000426911 2678 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ERCC2P18074 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC2P18074 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC2P18074 MSL3P1-202ENST00000440028 1468 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AC015689.2-201ENST00000528172 1738 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 AC068870.1-201ENST00000563737 2455 ntBASIC5.82□□□□□ -1.48
ERCC2P18074 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC2P18074 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC2P18074 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC2P18074 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC104964.3-201ENST00000606115 2860 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AL442128.2-201ENST00000620246 1824 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 GAPDHP24-201ENST00000328713 983 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ERCC2P18074 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 AL121886.1-201ENST00000358609 435 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 RN7SKP292-201ENST00000365522 317 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ERCC2P18074 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ERCC2P18074 OOSP1-201ENST00000398992 1270 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AL607077.1-201ENST00000401718 499 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 RMRPP5-201ENST00000411156 267 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC093155.2-201ENST00000420734 937 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 PRUNEP1-201ENST00000425846 705 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 BX119321.1-201ENST00000428912 797 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC073109.1-201ENST00000445066 978 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 RPS23P9-201ENST00000448848 438 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 LRRC37A14P-201ENST00000452297 462 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 SNORA43.3-201ENST00000517240 103 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AC022826.1-201ENST00000519383 805 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC084824.2-201ENST00000548906 345 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC009268.1-201ENST00000561352 1203 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.81□□□□□ -1.48
ERCC2P18074 MIR4311-201ENST00000580794 100 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AC020915.5-201ENST00000596836 964 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AL133406.3-201ENST00000606817 541 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AL159169.2-201ENST00000610061 1269 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 AC015712.7-201ENST00000615211 635 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC079776.5-201ENST00000641920 211 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 HSPD1P7-201ENST00000447985 1686 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC2P18074 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
ERCC2P18074 AC232271.1-201ENST00000602455 2715 ntBASIC5.81□□□□□ -1.48
ERCC2P18074 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC2P18074 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC2P18074 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ERCC2P18074 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
ERCC2P18074 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
ERCC2P18074 OR13C1P-202ENST00000641378 2919 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms