Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGA1P17096 DBIP1-201ENST00000401435 260 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 AL590399.2-201ENST00000427536 309 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC083899.1-201ENST00000454465 3819 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 RN7SL188P-201ENST00000469842 285 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGA1P17096 RN7SL826P-201ENST00000479724 288 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 RPSAP50-201ENST00000481955 852 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 OR11H3P-201ENST00000554547 982 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGA1P17096 BNIP3P32-201ENST00000600015 554 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 AP001267.4-201ENST00000602598 545 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 AL353729.2-201ENST00000605859 1249 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 MIR6730-201ENST00000622213 67 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 AC135068.5-201ENST00000624197 983 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 AL591135.1-201ENST00000401578 5914 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 AL137141.1-201ENST00000624622 4836 ntBASIC5.64□□□□□ -1.51
HMGA1P17096 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGA1P17096 ZNF733P-202ENST00000444809 1573 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGA1P17096 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 H3F3BP1-201ENST00000440551 403 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 OTX2P1-201ENST00000450956 354 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 AC092754.1-201ENST00000472975 479 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 RPS18P6-201ENST00000476880 458 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGA1P17096 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 YWHABP2-201ENST00000540201 713 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 AC068870.2-201ENST00000620635 389 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 CASC19-222ENST00000641321 1173 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGA1P17096 AC140479.2-201ENST00000421567 3130 ntBASIC5.63□□□□□ -1.51
HMGA1P17096 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGA1P17096 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGA1P17096 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGA1P17096 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGA1P17096 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGA1P17096 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HMGA1P17096 RN7SKP213-201ENST00000410746 298 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGA1P17096 PSMD10P3-201ENST00000437000 448 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGA1P17096 LINC02210-201ENST00000444561 288 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGA1P17096 RPL7AP6-201ENST00000477943 801 ntBASIC5.62□□□□□ -1.51
HMGA1P17096 AC058823.1-201ENST00000485315 474 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms