Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH1P12830 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH1P12830 AC122134.1-202ENST00000569111 1201 ntBASIC5.59□□□□□ -1.51
CDH1P12830 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CDH1P12830 OOSP1P2-201ENST00000579644 351 ntBASIC5.59□□□□□ -1.51
CDH1P12830 AL513327.3-201ENST00000602618 469 ntBASIC5.59□□□□□ -1.51
CDH1P12830 AL359742.1-201ENST00000622497 540 ntBASIC5.59□□□□□ -1.51
CDH1P12830 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH1P12830 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH1P12830 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH1P12830 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH1P12830 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH1P12830 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH1P12830 AC015689.2-201ENST00000528172 1738 ntBASIC5.59□□□□□ -1.51
CDH1P12830 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CDH1P12830 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.52
CDH1P12830 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH1P12830 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CDH1P12830 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.59□□□□□ -1.52
CDH1P12830 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 AL078595.2-201ENST00000605309 1780 ntBASIC5.58□□□□□ -1.52
CDH1P12830 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH1P12830 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AL357752.1-201ENST00000412817 349 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AC019205.1-201ENST00000421830 730 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AL035660.1-201ENST00000422041 222 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 Z85994.2-201ENST00000434327 452 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AL138899.2-201ENST00000439139 499 ntBASIC5.58□□□□□ -1.52
CDH1P12830 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 MTCO3P43-201ENST00000440974 771 ntBASIC5.58□□□□□ -1.52
CDH1P12830 MED28P3-201ENST00000444288 531 ntBASIC5.58□□□□□ -1.52
CDH1P12830 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH1P12830 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 RN7SL197P-201ENST00000466981 299 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH1P12830 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.58□□□□□ -1.52
CDH1P12830 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 OR8K2P-201ENST00000524645 927 ntBASIC5.58□□□□□ -1.52
CDH1P12830 HMGN2P36-201ENST00000529541 409 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 AC009268.1-201ENST00000561352 1203 ntBASIC5.58□□□□□ -1.52
CDH1P12830 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH1P12830 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH1P12830 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CDH1P12830 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 AL049840.6-201ENST00000604583 345 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AC108865.2-201ENST00000606881 432 ntBASIC5.58□□□□□ -1.52
CDH1P12830 AC129915.3-201ENST00000634128 948 ntBASIC5.58□□□□□ -1.52
CDH1P12830 OR8G3P-202ENST00000641572 1255 ntBASIC5.58□□□□□ -1.52
CDH1P12830 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH1P12830 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 AC011933.2-201ENST00000578539 2790 ntBASIC5.58□□□□□ -1.52
CDH1P12830 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH1P12830 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CDH1P12830 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH1P12830 NEPNP-201ENST00000404786 1371 ntBASIC5.57□□□□□ -1.52
CDH1P12830 TCP11X1-202ENST00000622971 1372 ntBASIC5.57□□□□□ -1.52
CDH1P12830 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDH1P12830 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.57□□□□□ -1.52
CDH1P12830 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDH1P12830 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDH1P12830 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH1P12830 LYPLA1P3-201ENST00000402650 695 ntBASIC5.57□□□□□ -1.52
CDH1P12830 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH1P12830 CDY8P-201ENST00000428380 1279 ntBASIC5.57□□□□□ -1.52
CDH1P12830 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDH1P12830 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.57□□□□□ -1.52
CDH1P12830 GAPDHP48-201ENST00000436626 961 ntBASIC5.57□□□□□ -1.52
CDH1P12830 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH1P12830 CYCSP51-201ENST00000443545 318 ntBASIC5.57□□□□□ -1.52
CDH1P12830 AC023271.1-201ENST00000445936 1090 ntBASIC5.57□□□□□ -1.52
CDH1P12830 CDY20P-201ENST00000447528 1279 ntBASIC5.57□□□□□ -1.52
CDH1P12830 OR52E7P-201ENST00000452394 933 ntBASIC5.57□□□□□ -1.52
CDH1P12830 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.57□□□□□ -1.52
CDH1P12830 NDUFA5P5-201ENST00000468361 342 ntBASIC5.57□□□□□ -1.52
CDH1P12830 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.57□□□□□ -1.52
CDH1P12830 MTND3P3-201ENST00000505004 126 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms