Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NPM1P38-201ENST00000403835 865 ntBASIC4.41□□□□□ -1.7
CD28P10747 MIR1286-201ENST00000408112 78 ntBASIC4.41□□□□□ -1.7
CD28P10747 RN7SKP17-201ENST00000411242 351 ntBASIC4.41□□□□□ -1.7
CD28P10747 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 NENFP1-201ENST00000419476 466 ntBASIC4.41□□□□□ -1.7
CD28P10747 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 AC021876.1-201ENST00000425959 359 ntBASIC4.41□□□□□ -1.7
CD28P10747 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.41□□□□□ -1.7
CD28P10747 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD28P10747 REG1CP-206ENST00000447469 496 ntBASIC4.41□□□□□ -1.7
CD28P10747 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 AL450023.1-201ENST00000450868 751 ntBASIC4.41□□□□□ -1.7
CD28P10747 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 AC011225.1-201ENST00000457751 369 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC114982.2-201ENST00000461396 358 ntBASIC4.41□□□□□ -1.7
CD28P10747 RPS23P2-201ENST00000463671 415 ntBASIC4.41□□□□□ -1.7
CD28P10747 RPS4XP1-201ENST00000482189 787 ntBASIC4.41□□□□□ -1.7
CD28P10747 AL035690.1-201ENST00000490892 383 ntBASIC4.41□□□□□ -1.7
CD28P10747 DUTP1-201ENST00000493631 470 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC090058.1-201ENST00000498788 435 ntBASIC4.41□□□□□ -1.7
CD28P10747 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 AC105384.2-201ENST00000508433 640 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 RN7SKP99-201ENST00000517028 307 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.41□□□□□ -1.7
CD28P10747 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.41□□□□□ -1.7
CD28P10747 HSPE1P2-201ENST00000554777 306 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC004825.1-201ENST00000555068 586 ntBASIC4.41□□□□□ -1.7
CD28P10747 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.41□□□□□ -1.7
CD28P10747 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 AC092944.2-201ENST00000605443 889 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC016769.4-201ENST00000616893 535 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC132068.1-201ENST00000623805 459 ntBASIC4.41□□□□□ -1.7
CD28P10747 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.41□□□□□ -1.7
CD28P10747 CASC19-264ENST00000641912 1184 ntBASIC4.41□□□□□ -1.7
CD28P10747 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD28P10747 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
CD28P10747 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD28P10747 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CD28P10747 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.41□□□□□ -1.7
CD28P10747 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD28P10747 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CD28P10747 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.4□□□□□ -1.7
CD28P10747 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.4□□□□□ -1.7
CD28P10747 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CD28P10747 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.4□□□□□ -1.7
CD28P10747 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.4□□□□□ -1.7
CD28P10747 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CD28P10747 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CD28P10747 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CD28P10747 RNA5SP234-201ENST00000363916 119 ntBASIC4.4□□□□□ -1.71
CD28P10747 RN7SKP186-201ENST00000365371 303 ntBASIC4.4□□□□□ -1.71
CD28P10747 RNU4-2-201ENST00000365668 141 ntBASIC4.4□□□□□ -1.71
CD28P10747 RNU11-201ENST00000387069 134 ntBASIC4.4□□□□□ -1.71
CD28P10747 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CD28P10747 SPTLC1P2-201ENST00000407089 121 ntBASIC4.4□□□□□ -1.71
CD28P10747 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 RNU4-34P-201ENST00000410431 124 ntBASIC4.4□□□□□ -1.71
CD28P10747 DPPA2P3-201ENST00000411853 655 ntBASIC4.4□□□□□ -1.71
CD28P10747 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC010740.1-201ENST00000417035 684 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.4□□□□□ -1.71
CD28P10747 AL365220.1-201ENST00000432923 399 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC096775.1-201ENST00000437724 448 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC006335.2-201ENST00000437993 330 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AC019185.1-201ENST00000442718 389 ntBASIC4.4□□□□□ -1.71
CD28P10747 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.4□□□□□ -1.71
CD28P10747 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 OSTCP1-201ENST00000455507 450 ntBASIC4.4□□□□□ -1.71
CD28P10747 COPS8P2-201ENST00000473228 627 ntBASIC4.4□□□□□ -1.71
CD28P10747 RN7SL583P-201ENST00000475692 287 ntBASIC4.4□□□□□ -1.71
CD28P10747 CR383656.1-201ENST00000484916 377 ntBASIC4.4□□□□□ -1.71
CD28P10747 EIF1P7-201ENST00000487533 337 ntBASIC4.4□□□□□ -1.71
CD28P10747 RN7SL30P-201ENST00000488416 306 ntBASIC4.4□□□□□ -1.71
CD28P10747 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 AC090638.1-201ENST00000498296 909 ntBASIC4.4□□□□□ -1.71
CD28P10747 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.4□□□□□ -1.71
CD28P10747 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.4□□□□□ -1.71
CD28P10747 RNA5SP92-201ENST00000516437 110 ntBASIC4.4□□□□□ -1.71
CD28P10747 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.4□□□□□ -1.71
CD28P10747 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms