Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC01355-201ENST00000566551 5444 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 PPIAP9-201ENST00000403866 498 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 RPL12P9-201ENST00000412942 488 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 RPL35AP31-201ENST00000418340 337 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 Z82198.3-201ENST00000421145 199 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 FAM183DP-201ENST00000421987 399 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL139158.1-201ENST00000424719 340 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL121578.1-201ENST00000428051 892 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 KCTD9P1-201ENST00000430462 1167 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 OR6C71P-201ENST00000432580 913 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC00328-2P-201ENST00000436585 219 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 NPM1P33-201ENST00000438918 872 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 NANOGP9-201ENST00000439890 892 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 ZNF619P1-201ENST00000446539 752 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL591473.1-201ENST00000464297 313 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 NPM1P29-201ENST00000483112 803 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC090638.1-201ENST00000498296 909 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC008629.2-201ENST00000503783 483 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 IMPA1P1-201ENST00000510718 842 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 OR5AM1P-201ENST00000532136 1032 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 MIR5010-201ENST00000582846 120 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC087468.1-201ENST00000604365 630 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC145423.1-201ENST00000605712 336 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC022960.2-201ENST00000616300 666 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AL022393.1-201ENST00000625142 1677 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQA1P01909 Z83820.1-201ENST00000456978 1499 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.18□□□□□ -1.74
HLA-DQA1P01909 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 PSG10P-201ENST00000501199 1500 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC100757.1-201ENST00000616872 1835 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RNA5SP279-201ENST00000365513 117 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RN7SKP292-201ENST00000365522 317 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 UBBP2-201ENST00000376781 231 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 MRPL53P1-201ENST00000414323 319 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC012519.1-201ENST00000424588 610 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQA1P01909 RPL7P56-201ENST00000429441 717 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AL389925.1-201ENST00000432257 728 ntBASIC4.17□□□□□ -1.74
HLA-DQA1P01909 AC064862.5-201ENST00000440618 334 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms