Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 TCP11X1-202ENST00000622971 1372 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 AC015689.2-201ENST00000528172 1738 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.21□□□□□ -1.58
UPK1AO00322 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.21□□□□□ -1.58
UPK1AO00322 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UPK1AO00322 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.21□□□□□ -1.58
UPK1AO00322 REREP1Y-201ENST00000422655 198 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC007161.1-204ENST00000423039 460 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC113412.1-201ENST00000425840 504 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 REREP2Y-201ENST00000439103 200 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UPK1AO00322 AC084754.1-201ENST00000463466 464 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC012123.2-201ENST00000485809 248 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.21□□□□□ -1.58
UPK1AO00322 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 AC098976.1-201ENST00000513014 541 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.21□□□□□ -1.58
UPK1AO00322 CYCSP22-201ENST00000517555 339 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 OR5AM1P-201ENST00000532136 1032 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 AC106730.2-201ENST00000566641 540 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC025574.2-201ENST00000615621 514 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.21□□□□□ -1.58
UPK1AO00322 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 AC144833.1-201ENST00000567953 4089 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 OR13C1P-202ENST00000641378 2919 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
UPK1AO00322 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.21□□□□□ -1.58
UPK1AO00322 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UPK1AO00322 MT-RNR2-201ENST00000387347 1559 ntBASIC5.21□□□□□ -1.58
UPK1AO00322 AL442128.2-201ENST00000620246 1824 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 AP001157.1-201ENST00000550837 2339 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
UPK1AO00322 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UPK1AO00322 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UPK1AO00322 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 RN7SKP292-201ENST00000365522 317 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UPK1AO00322 PPIAP9-201ENST00000403866 498 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 DPPA2P2-201ENST00000418220 897 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 TRGV5P-201ENST00000419915 354 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 IPPKP1-201ENST00000422501 768 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 RIMKLBP2-201ENST00000424737 654 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UPK1AO00322 HSPD1P12-201ENST00000429127 1069 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 AP000547.1-201ENST00000454360 617 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 RN7SL188P-201ENST00000469842 285 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 PSMA2P2-201ENST00000504319 686 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 SNORD46.2-201ENST00000516021 102 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.2□□□□□ -1.58
UPK1AO00322 TRIM51DP-201ENST00000529746 596 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 NDUFA5P11-201ENST00000567995 343 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 MTCYBP13-201ENST00000578634 1093 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC023389.2-201ENST00000580031 955 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 H3F3BP2-201ENST00000583907 357 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC108738.1-201ENST00000603703 237 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 AC138965.3-201ENST00000623875 498 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 AC016542.2-201ENST00000624201 619 ntBASIC5.2□□□□□ -1.58
UPK1AO00322 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UPK1AO00322 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1AO00322 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1AO00322 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.2□□□□□ -1.58
UPK1AO00322 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.2□□□□□ -1.58
UPK1AO00322 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1AO00322 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UPK1AO00322 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
UPK1AO00322 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms