Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC011476.1-201ENST00000466725 307 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AL122020.1-201ENST00000472287 459 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC087888.1-201ENST00000550884 1254 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC027176.2-201ENST00000559166 746 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 ZNF322P1-201ENST00000568013 1209 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MIR4776-2-201ENST00000580204 80 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 VN1R87P-201ENST00000596706 487 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC011445.2-201ENST00000599274 173 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC125494.2-201ENST00000602431 657 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 FAM27E4-201ENST00000605259 342 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC096861.1-201ENST00000616652 240 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC103703.1-201ENST00000634783 663 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC116667.2-201ENST00000641075 823 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MTCO1P7-201ENST00000419523 1542 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC012254.3-201ENST00000591183 2117 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AL731556.1-201ENST00000394628 3711 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 NEPNP-201ENST00000404786 1371 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 OR4K17-201ENST00000315543 1032 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RNU105B-201ENST00000364478 208 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC009506.2-201ENST00000420635 840 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RPS15AP30-201ENST00000420976 390 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 MTND1P31-201ENST00000449206 961 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 RN7SL174P-201ENST00000475578 289 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC106872.4-201ENST00000510050 523 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC112191.2-201ENST00000522428 333 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AP003080.1-202ENST00000526526 915 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AP005639.1-201ENST00000526939 192 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC005412.1-201ENST00000580812 1049 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC091057.3-201ENST00000602684 733 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC114878.2-201ENST00000604863 1251 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC135178.6-201ENST00000605314 398 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AL445649.1-201ENST00000615941 691 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC018926.1-201ENST00000616335 435 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC007342.5-201ENST00000571340 2142 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 CDC27P2-201ENST00000425026 1922 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 AC092111.2-201ENST00000611627 1414 ntBASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CTDP1Q9Y5B0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CTDP1Q9Y5B0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms