Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL137058.3-201ENST00000624531 3099 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 Z83820.1-201ENST00000456978 1499 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL590763.1-201ENST00000398297 1545 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 MAPK10-286ENST00000641208 8747 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 RNU1-136P-201ENST00000384181 164 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC108693.1-201ENST00000496068 432 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 HMGB1P42-201ENST00000532126 553 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 MIR6719-201ENST00000622428 87 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 SNORA58B-201ENST00000364259 136 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 VN1R21P-201ENST00000426703 765 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 RPL5P2-201ENST00000429598 854 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 IGBP1P3-201ENST00000447449 1000 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC099521.1-201ENST00000482557 334 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 RPEP1-201ENST00000504507 658 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 RNA5SP34-201ENST00000516887 130 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC078899.1-201ENST00000521432 1185 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AP001496.3-201ENST00000580230 913 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 PPATP2-201ENST00000605635 508 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AL035661.1-201ENST00000620459 1144 ntBASIC5.31□□□□□ -1.56
CCDC88CQ9P219 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC88CQ9P219 CR788268.1-201ENST00000603931 1809 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 METTL15P3-201ENST00000415522 1221 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC023245.1-201ENST00000468501 517 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC079080.1-201ENST00000479841 822 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 MIR4260-201ENST00000583107 67 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC000068.2-201ENST00000608816 460 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AL121612.2-201ENST00000612261 482 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC132068.1-201ENST00000623805 459 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC092451.3-201ENST00000625067 1343 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC010401.2-201ENST00000575137 4934 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC245047.2-201ENST00000441060 530 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 RPS7P6-201ENST00000485777 579 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC126615.2-201ENST00000553003 515 ntBASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC88CQ9P219 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms