Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 FUNDC2P3-201ENST00000334716 533 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 RNU6-1251P-201ENST00000364502 107 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 NDUFA5P1-201ENST00000433858 341 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC022215.1-201ENST00000481770 362 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC012123.2-201ENST00000485809 248 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 RPS17P5-201ENST00000498293 408 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC090058.1-201ENST00000498788 435 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 PSMA2P2-201ENST00000504319 686 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 OR4V1P-201ENST00000525394 1140 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC090888.3-201ENST00000558917 509 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC100767.2-201ENST00000604840 693 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AC015712.7-201ENST00000615211 635 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 AL133370.2-201ENST00000619934 439 ntBASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
BLOC1S4Q9NUP1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
BLOC1S4Q9NUP1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
BLOC1S4Q9NUP1 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC006206.1-201ENST00000544842 3387 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 PWAR1-201ENST00000624188 2414 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 GAPDHP24-201ENST00000328713 983 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 MIR375-201ENST00000362103 64 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 GAPDHP15-201ENST00000398586 975 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SUMO2P3-201ENST00000438311 288 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AL138899.2-201ENST00000439139 499 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 MEMO1P4-201ENST00000453590 386 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 DUTP7-201ENST00000507982 486 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 RN7SKP253-201ENST00000516424 309 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 HMGB1P42-201ENST00000532126 553 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AP004609.2-201ENST00000532177 190 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 RMST_5.1-201ENST00000618704 126 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 MTCO1P7-201ENST00000419523 1542 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC068870.1-201ENST00000563737 2455 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 AC106872.5-201ENST00000508856 1416 ntBASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.33□□□□□ -1.4
BLOC1S4Q9NUP1 OR13C1P-202ENST00000641378 2919 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 UGT2B24P-201ENST00000514441 1597 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 RN7SKP292-201ENST00000365522 317 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 MIR621-201ENST00000384919 96 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 MT-RNR1-201ENST00000389680 954 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 RNU6-1320P-201ENST00000390838 107 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 RNU6-1269P-201ENST00000391139 107 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 RPS3AP2-201ENST00000407190 754 ntBASIC6.32□□□□□ -1.4
BLOC1S4Q9NUP1 RN7SKP17-201ENST00000411242 351 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms