Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC244502.2-201ENST00000543361 851 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 MIR4420-201ENST00000583944 77 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 BUB1P1-201ENST00000603541 607 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL356986.1-201ENST00000604085 341 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC025588.2-201ENST00000604851 466 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC011472.4-201ENST00000615848 491 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC010975.3-201ENST00000618727 978 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AP002782.1-201ENST00000623107 614 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC079416.3-201ENST00000624479 549 ntBASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.18□□□□□ -1.42
CCM2LQ9NUG4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RNU6-224P-201ENST00000384055 107 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RNU6-452P-201ENST00000384406 107 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RNU6-244P-201ENST00000391028 104 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL049545.1-201ENST00000401856 572 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RNA5SP498-201ENST00000411342 120 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 VTA1P1-201ENST00000414044 866 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RPS7P12-201ENST00000422385 582 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 SNRPEP5-201ENST00000425442 278 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC021876.1-201ENST00000425959 359 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC007365.2-201ENST00000428806 458 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RPS6P15-201ENST00000431996 751 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 EIF5AP4-201ENST00000441206 465 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 TIMM8BP2-201ENST00000445940 251 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC004022.1-201ENST00000447766 1066 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC244505.3-201ENST00000454598 187 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC118758.1-202ENST00000454719 225 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 SNX18P26-201ENST00000458433 740 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RN7SKP198-201ENST00000459286 306 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RN7SL170P-201ENST00000487098 295 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RN7SL568P-201ENST00000493069 298 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RN7SKP11-201ENST00000517018 287 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC006518.2-201ENST00000542513 940 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC023050.2-201ENST00000544968 387 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL121579.2-201ENST00000555466 590 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 GARSP1-201ENST00000570895 719 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 PCNAP1-202ENST00000595299 752 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AC092954.1-201ENST00000609121 445 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 AL121895.2-201ENST00000619558 447 ntBASIC6.17□□□□□ -1.42
CCM2LQ9NUG4 MIR6503-201ENST00000622884 86 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms