Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PDCL3P4-201ENST00000489621 720 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC090058.1-201ENST00000498788 435 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 ST13P12-201ENST00000508958 1094 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 BTG4P1-201ENST00000510421 183 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC021483.2-201ENST00000567415 758 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC090826.1-203ENST00000569235 490 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC145423.1-201ENST00000605712 336 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AL136131.3-201ENST00000607600 188 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC084824.5-201ENST00000612009 413 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC111152.1-202ENST00000635848 339 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC008627.1-201ENST00000517511 1704 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CAP1P2-201ENST00000417455 1409 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AP005432.1-201ENST00000580891 3485 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC068870.3-201ENST00000625077 2536 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RPL11P3-201ENST00000395256 523 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AL391422.1-201ENST00000402155 436 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC016739.1-201ENST00000405359 345 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RPL6P30-201ENST00000443382 862 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 BMS1P10-201ENST00000443754 1120 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 MIR2117-201ENST00000516780 80 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 NOP56P3-201ENST00000549457 385 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC122134.1-201ENST00000565664 1104 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC233266.2-201ENST00000567067 528 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC060780.2-201ENST00000589047 198 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 PPATP2-201ENST00000605635 508 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC005828.7-201ENST00000607331 556 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 MIR6721-201ENST00000617181 87 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AL138960.2-201ENST00000625145 535 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AL359715.3-201ENST00000569267 2123 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC097461.1-201ENST00000568928 2821 ntBASIC5.66□□□□□ -1.5
BRF2Q9HAW0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.65□□□□□ -1.5
BRF2Q9HAW0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms