Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RSU1P3-201ENST00000412878 835 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC073136.2-201ENST00000417282 849 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 PDCL2P1-201ENST00000419302 352 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RPL36P1-201ENST00000419720 225 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL358176.2-201ENST00000425769 204 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC244505.5-201ENST00000443639 207 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC013787.1-201ENST00000460165 307 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC063955.1-201ENST00000462872 685 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RN7SL251P-201ENST00000464175 297 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC084878.1-201ENST00000480555 648 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC092349.1-201ENST00000504903 310 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 NACAP6-201ENST00000509572 622 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 OR5BN1P-201ENST00000532955 829 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MIR3913-1-201ENST00000577744 102 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC022916.3-201ENST00000592961 742 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL133370.2-201ENST00000619934 439 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC104447.1-201ENST00000624214 2124 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL121835.2-201ENST00000624253 3502 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 OR10AB1P-202ENST00000641219 1686 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 Y_RNA.18-201ENST00000362461 102 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 Y_RNA.202-201ENST00000364083 110 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 Y_RNA.296-201ENST00000364930 108 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 RNU6-767P-201ENST00000384132 107 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 FAUP2-201ENST00000394301 401 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL034417.1-201ENST00000399343 800 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 PSMD8P1-201ENST00000436275 769 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL731892.1-201ENST00000437364 1192 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 CYCSP44-201ENST00000448560 313 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SRP68P2-201ENST00000456184 254 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 PNPLA4P1-201ENST00000458328 305 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 RPL12P40-201ENST00000467028 488 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC093278.1-201ENST00000494700 600 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 MRPL57P6-201ENST00000506570 309 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC093770.1-201ENST00000511559 571 ntBASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.67□□□□□ -1.18
NPAS3Q8IXF0 ARL2BPP5-201ENST00000523141 481 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms