Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 MTND6P32-201ENST00000457611 483 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC025458.1-201ENST00000506046 166 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC010343.2-201ENST00000510162 224 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 RNU6-760P-201ENST00000516078 97 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC005632.2-201ENST00000564271 828 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC122134.1-201ENST00000565664 1104 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC027281.1-201ENST00000574178 758 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC027334.1-201ENST00000603257 310 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC114477.1-201ENST00000605097 605 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC092574.1-201ENST00000609771 420 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC006213.4-201ENST00000616184 634 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC103798.2-201ENST00000624292 632 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC073488.6-201ENST00000632293 754 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC133552.1-201ENST00000569988 4007 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC093849.1-201ENST00000563631 2209 ntBASIC5.07□□□□□ -1.6
PDLIM3Q53GG5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 BCORP1-203ENST00000513194 5093 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 HDAC1P2-201ENST00000453661 1398 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 OR9K1P-201ENST00000326513 941 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 RN7SKP115-201ENST00000363177 317 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL353625.1-202ENST00000366273 571 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL391361.1-201ENST00000405580 489 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 RANP6-201ENST00000413691 644 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL157884.1-201ENST00000424561 454 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 FAR1P1-201ENST00000427163 934 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 HMGB3P10-201ENST00000434734 572 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL020997.1-201ENST00000446554 349 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 MTND2P25-201ENST00000449028 610 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC231760.1-201ENST00000498002 260 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 ZNF519P4-201ENST00000514008 125 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 RNA5SP271-201ENST00000516700 88 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 CYCSP25-201ENST00000525280 316 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 OR7E10P-201ENST00000526420 991 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC079905.1-201ENST00000549280 475 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC007346.1-201ENST00000569208 867 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 MIR4675-201ENST00000577898 77 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 SYPL1P2-201ENST00000582878 727 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AP001267.4-201ENST00000602598 545 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC009237.12-201ENST00000604755 742 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC007423.1-201ENST00000605009 627 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC012557.1-201ENST00000607115 611 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AC073488.3-201ENST00000631611 778 ntBASIC5.06□□□□□ -1.6
PDLIM3Q53GG5 AF287957.1-201ENST00000607368 1595 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms