Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ZNF402P-201ENST00000404435 3100 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 RNU6-697P-201ENST00000363348 107 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 RNA5SP514-201ENST00000363717 111 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 RNU6-670P-201ENST00000364312 104 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 MIR7-1-201ENST00000384871 110 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 U3.25-201ENST00000391209 220 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC007068.1-201ENST00000396690 844 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 OR6E1P-201ENST00000414424 923 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK3Q00526 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC079355.1-201ENST00000421770 223 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 ARAFP1-201ENST00000422172 605 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 TNPO1P1-201ENST00000423641 1138 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 USP24P1-201ENST00000433802 779 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 FMO7P-201ENST00000436045 768 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 DNAJC19P5-201ENST00000443295 316 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC128716.1-201ENST00000475129 166 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AL136038.1-201ENST00000497246 351 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK3Q00526 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK3Q00526 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC005000.1-201ENST00000536192 288 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 HSPE1P2-201ENST00000554777 306 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.63□□□□□ -1.51
CDK3Q00526 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK3Q00526 AL513327.3-201ENST00000602618 469 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AL589674.2-201ENST00000604304 337 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 AC020763.5-201ENST00000623298 430 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 AC007683.2-201ENST00000624681 714 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK3Q00526 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK3Q00526 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK3Q00526 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 ICE2P1-201ENST00000512800 1849 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK3Q00526 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDK3Q00526 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK3Q00526 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK3Q00526 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDK3Q00526 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CDK3Q00526 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK3Q00526 RNU6-618P-201ENST00000363518 112 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 GNG5P2-201ENST00000372054 207 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 MIR143-201ENST00000385300 106 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 RNA5SP91-201ENST00000390902 119 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 AL121977.1-201ENST00000401636 979 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 RPS6P23-201ENST00000413224 722 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 RAB9AP4-201ENST00000415230 609 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 AL121776.1-201ENST00000429337 372 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 NDUFA5P1-201ENST00000433858 341 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 MEMO1P4-201ENST00000453590 386 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 AC018638.3-201ENST00000461273 132 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK3Q00526 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 RN7SL466P-201ENST00000497546 295 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 AC011411.1-201ENST00000509592 876 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 RNA5SP362-201ENST00000516048 118 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK3Q00526 AC104997.1-201ENST00000519761 717 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK3Q00526 AC003001.2-201ENST00000616294 831 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDK3Q00526 SAMMSON-210ENST00000641260 1308 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 AC005261.6-201ENST00000623072 1387 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 OR51C1P-202ENST00000641159 1444 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 Z83820.1-201ENST00000456978 1499 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK3Q00526 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 AC027279.4-201ENST00000624371 2072 ntBASIC5.62□□□□□ -1.51
CDK3Q00526 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK3Q00526 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDK3Q00526 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 AC005261.2-201ENST00000593427 4258 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 SNORA51.1-201ENST00000363243 140 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms