Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC242426.1-201ENST00000435270 960 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 AL663074.2-201ENST00000440621 479 ntBASIC5.32□□□□□ -1.56
CDH11P55287 SEPT14P12-201ENST00000442280 560 ntBASIC5.32□□□□□ -1.56
CDH11P55287 ZNF619P1-201ENST00000446539 752 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 OR7E157P-201ENST00000494376 911 ntBASIC5.32□□□□□ -1.56
CDH11P55287 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 RNA5SP340-201ENST00000517132 107 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC060775.1-201ENST00000518241 520 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH11P55287 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH11P55287 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH11P55287 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 AC005972.3-201ENST00000606304 481 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC092574.1-201ENST00000609771 420 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC006213.4-201ENST00000616184 634 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC096861.1-201ENST00000616652 240 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AL445670.1-201ENST00000618889 801 ntBASIC5.32□□□□□ -1.56
CDH11P55287 FO681491.1-202ENST00000623392 737 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC005618.4-201ENST00000625053 554 ntBASIC5.32□□□□□ -1.56
CDH11P55287 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH11P55287 AC008691.1-209ENST00000642094 814 ntBASIC5.32□□□□□ -1.56
CDH11P55287 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 AC024341.1-201ENST00000526444 1552 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AL031595.2-201ENST00000624215 19071 ntBASIC5.32□□□□□ -1.56
CDH11P55287 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CDH11P55287 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 MTND4P21-201ENST00000453886 1357 ntBASIC5.31□□□□□ -1.56
CDH11P55287 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH11P55287 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 RNA5SP510-201ENST00000364697 99 ntBASIC5.31□□□□□ -1.56
CDH11P55287 MIR7-1-201ENST00000384871 110 ntBASIC5.31□□□□□ -1.56
CDH11P55287 MIR323B-201ENST00000385269 82 ntBASIC5.31□□□□□ -1.56
CDH11P55287 SNORA40.4-201ENST00000390971 128 ntBASIC5.31□□□□□ -1.56
CDH11P55287 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 NPM1P38-201ENST00000403835 865 ntBASIC5.31□□□□□ -1.56
CDH11P55287 RN7SKP279-201ENST00000411383 298 ntBASIC5.31□□□□□ -1.56
CDH11P55287 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH11P55287 AL512504.1-201ENST00000415494 778 ntBASIC5.31□□□□□ -1.56
CDH11P55287 RPL35AP31-201ENST00000418340 337 ntBASIC5.31□□□□□ -1.56
CDH11P55287 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH11P55287 AC096775.1-201ENST00000437724 448 ntBASIC5.31□□□□□ -1.56
CDH11P55287 CYCSP51-201ENST00000443545 318 ntBASIC5.31□□□□□ -1.56
CDH11P55287 RPS15AP29-201ENST00000445539 400 ntBASIC5.31□□□□□ -1.56
CDH11P55287 CFL1P4-201ENST00000451536 498 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AC084754.1-201ENST00000463466 464 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH11P55287 AC006499.4-201ENST00000510947 694 ntBASIC5.31□□□□□ -1.56
CDH11P55287 OR10D4P-201ENST00000525892 951 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH11P55287 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH11P55287 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH11P55287 RPA2P1-201ENST00000556557 721 ntBASIC5.31□□□□□ -1.56
CDH11P55287 LINC00556-201ENST00000569603 412 ntBASIC5.31□□□□□ -1.56
CDH11P55287 ADAD1P2-201ENST00000588476 646 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AC008521.2-201ENST00000591021 259 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH11P55287 AC010487.1-201ENST00000594408 1172 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 AC068768.2-201ENST00000602352 343 ntBASIC5.31□□□□□ -1.56
CDH11P55287 RPL21P136-201ENST00000605378 396 ntBASIC5.31□□□□□ -1.56
CDH11P55287 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 AC026367.3-201ENST00000619032 590 ntBASIC5.31□□□□□ -1.56
CDH11P55287 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
CDH11P55287 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH11P55287 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH11P55287 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
CDH11P55287 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 LINC02019-201ENST00000608605 2060 ntBASIC5.3□□□□□ -1.56
CDH11P55287 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms