Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC134669.1-201ENST00000581275 672 ntBASIC6.31□□□□□ -1.4
COPB1P53618 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.31□□□□□ -1.4
COPB1P53618 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 AP001962.1-201ENST00000624114 559 ntBASIC6.31□□□□□ -1.4
COPB1P53618 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.31□□□□□ -1.4
COPB1P53618 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
COPB1P53618 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 AC109446.4-201ENST00000623235 2755 ntBASIC6.31□□□□□ -1.4
COPB1P53618 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 AL137058.3-201ENST00000624531 3099 ntBASIC6.31□□□□□ -1.4
COPB1P53618 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 AL449283.1-201ENST00000602631 3403 ntBASIC6.31□□□□□ -1.4
COPB1P53618 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.31□□□□□ -1.4
COPB1P53618 AL161912.4-201ENST00000623889 2468 ntBASIC6.31□□□□□ -1.4
COPB1P53618 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COPB1P53618 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
COPB1P53618 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COPB1P53618 RNA5SP279-201ENST00000365513 117 ntBASIC6.3□□□□□ -1.4
COPB1P53618 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.3□□□□□ -1.4
COPB1P53618 RBBP4P5-201ENST00000398583 1266 ntBASIC6.3□□□□□ -1.4
COPB1P53618 GCNT1P4-201ENST00000404096 329 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC096921.1-201ENST00000411661 375 ntBASIC6.3□□□□□ -1.4
COPB1P53618 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AL354766.1-201ENST00000423396 542 ntBASIC6.3□□□□□ -1.4
COPB1P53618 OR10T1P-201ENST00000424327 947 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 AL590399.4-201ENST00000436561 601 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC005077.1-201ENST00000449226 375 ntBASIC6.3□□□□□ -1.4
COPB1P53618 MEMO1P4-201ENST00000453590 386 ntBASIC6.3□□□□□ -1.4
COPB1P53618 RPL31P53-201ENST00000457065 348 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC093166.4-201ENST00000457867 318 ntBASIC6.3□□□□□ -1.4
COPB1P53618 EIF2S2P4-201ENST00000461070 984 ntBASIC6.3□□□□□ -1.4
COPB1P53618 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.3□□□□□ -1.4
COPB1P53618 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.3□□□□□ -1.4
COPB1P53618 AC084121.1-201ENST00000533882 835 ntBASIC6.3□□□□□ -1.4
COPB1P53618 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 AC139697.1-201ENST00000548429 745 ntBASIC6.3□□□□□ -1.4
COPB1P53618 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AC005244.1-201ENST00000582566 339 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.3□□□□□ -1.4
COPB1P53618 AL136131.3-201ENST00000607600 188 ntBASIC6.3□□□□□ -1.4
COPB1P53618 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.3□□□□□ -1.4
COPB1P53618 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 MIR6721-201ENST00000617181 87 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC009120.7-201ENST00000623452 780 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AC090772.4-201ENST00000623599 362 ntBASIC6.3□□□□□ -1.4
COPB1P53618 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.3□□□□□ -1.4
COPB1P53618 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.3□□□□□ -1.4
COPB1P53618 MIR1910-201ENST00000636955 80 ntBASIC6.3□□□□□ -1.4
COPB1P53618 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
COPB1P53618 NLRP3P1-201ENST00000622303 1785 ntBASIC6.3□□□□□ -1.4
COPB1P53618 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
COPB1P53618 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COPB1P53618 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COPB1P53618 QRSL1P1-201ENST00000400977 1540 ntBASIC6.3□□□□□ -1.4
COPB1P53618 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COPB1P53618 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COPB1P53618 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
COPB1P53618 HSPD1P9-201ENST00000420325 1636 ntBASIC6.29□□□□□ -1.4
COPB1P53618 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.29□□□□□ -1.4
COPB1P53618 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPB1P53618 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COPB1P53618 RNA5SP326-201ENST00000363209 110 ntBASIC6.29□□□□□ -1.4
COPB1P53618 RN7SKP145-201ENST00000363291 303 ntBASIC6.29□□□□□ -1.4
COPB1P53618 RNA5SP435-201ENST00000364044 108 ntBASIC6.29□□□□□ -1.4
COPB1P53618 RNA5SP433-201ENST00000364491 114 ntBASIC6.29□□□□□ -1.4
COPB1P53618 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COPB1P53618 RNA5SP122-201ENST00000384457 108 ntBASIC6.29□□□□□ -1.4
COPB1P53618 MIR130A-201ENST00000385274 89 ntBASIC6.29□□□□□ -1.4
COPB1P53618 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COPB1P53618 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COPB1P53618 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.29□□□□□ -1.4
COPB1P53618 MTND4P11-201ENST00000417020 1058 ntBASIC6.29□□□□□ -1.4
COPB1P53618 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.29□□□□□ -1.4
COPB1P53618 AC019205.1-201ENST00000421830 730 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms