Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.45□□□□□ -1.22
USP11P51784 AC124891.1-201ENST00000536322 519 ntBASIC7.45□□□□□ -1.22
USP11P51784 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
USP11P51784 MTND4LP24-201ENST00000572277 291 ntBASIC7.45□□□□□ -1.22
USP11P51784 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
USP11P51784 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.45□□□□□ -1.22
USP11P51784 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 MIR6813-201ENST00000621638 56 ntBASIC7.45□□□□□ -1.22
USP11P51784 AC073862.4-201ENST00000622982 854 ntBASIC7.45□□□□□ -1.22
USP11P51784 AC007494.3-201ENST00000624660 743 ntBASIC7.45□□□□□ -1.22
USP11P51784 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.45□□□□□ -1.22
USP11P51784 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
USP11P51784 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USP11P51784 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USP11P51784 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.45□□□□□ -1.22
USP11P51784 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USP11P51784 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USP11P51784 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 AC111188.2-201ENST00000529697 1387 ntBASIC7.45□□□□□ -1.22
USP11P51784 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
USP11P51784 AL136531.3-201ENST00000624378 3658 ntBASIC7.45□□□□□ -1.22
USP11P51784 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.45□□□□□ -1.22
USP11P51784 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
USP11P51784 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 MTND5P24-201ENST00000438892 1767 ntBASIC7.44□□□□□ -1.22
USP11P51784 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 PABPC1P8-201ENST00000452851 2086 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC017002.4-201ENST00000604721 1525 ntBASIC7.44□□□□□ -1.22
USP11P51784 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 MTHFD2P5-201ENST00000320415 844 ntBASIC7.44□□□□□ -1.22
USP11P51784 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 RNU5B-1-201ENST00000363286 116 ntBASIC7.44□□□□□ -1.22
USP11P51784 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 AL133260.1-201ENST00000405720 405 ntBASIC7.44□□□□□ -1.22
USP11P51784 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.44□□□□□ -1.22
USP11P51784 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.44□□□□□ -1.22
USP11P51784 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.44□□□□□ -1.22
USP11P51784 MTND4P28-201ENST00000426217 387 ntBASIC7.44□□□□□ -1.22
USP11P51784 MTCO2P19-201ENST00000427513 598 ntBASIC7.44□□□□□ -1.22
USP11P51784 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.44□□□□□ -1.22
USP11P51784 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
USP11P51784 AC013403.1-201ENST00000436954 263 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC000041.1-201ENST00000439655 175 ntBASIC7.44□□□□□ -1.22
USP11P51784 FGF7P5-201ENST00000441829 291 ntBASIC7.44□□□□□ -1.22
USP11P51784 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 KF459542.1-201ENST00000450908 553 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC234781.3-201ENST00000452540 973 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC004890.1-201ENST00000461005 181 ntBASIC7.44□□□□□ -1.22
USP11P51784 BZW1P2-201ENST00000473537 826 ntBASIC7.44□□□□□ -1.22
USP11P51784 SYPL1P1-201ENST00000473622 768 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC015864.1-201ENST00000496512 544 ntBASIC7.44□□□□□ -1.22
USP11P51784 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.44□□□□□ -1.22
USP11P51784 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 OR52K3P-201ENST00000531655 943 ntBASIC7.44□□□□□ -1.22
USP11P51784 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.44□□□□□ -1.22
USP11P51784 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USP11P51784 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.44□□□□□ -1.22
USP11P51784 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.44□□□□□ -1.22
USP11P51784 EIF1P4-201ENST00000572664 335 ntBASIC7.44□□□□□ -1.22
USP11P51784 AL953862.2-201ENST00000603089 820 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC004805.3-201ENST00000603178 310 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC009237.12-201ENST00000604755 742 ntBASIC7.44□□□□□ -1.22
USP11P51784 CYCSP1-201ENST00000604815 315 ntBASIC7.44□□□□□ -1.22
USP11P51784 HMGB1P51-201ENST00000605166 638 ntBASIC7.44□□□□□ -1.22
USP11P51784 AP003392.5-201ENST00000607857 415 ntBASIC7.44□□□□□ -1.22
USP11P51784 AF250324.2-201ENST00000608299 610 ntBASIC7.44□□□□□ -1.22
USP11P51784 AC010975.3-201ENST00000618727 978 ntBASIC7.44□□□□□ -1.22
USP11P51784 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.44□□□□□ -1.22
USP11P51784 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.44□□□□□ -1.22
USP11P51784 MTND4P31-201ENST00000425607 1343 ntBASIC7.44□□□□□ -1.22
USP11P51784 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 UGT2B27P-201ENST00000505092 1620 ntBASIC7.44□□□□□ -1.22
USP11P51784 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USP11P51784 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms