Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AL157777.1-201ENST00000468100 304 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.78□□□□□ -1.32
SMARCA1P28370 RNU6-491P-201ENST00000516099 110 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC092121.1-201ENST00000569452 202 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC027243.2-201ENST00000602530 724 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.78□□□□□ -1.32
SMARCA1P28370 AC016597.2-201ENST00000613256 341 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AC022960.3-201ENST00000619794 441 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AC090772.4-201ENST00000623599 362 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 AC090506.2-201ENST00000624521 419 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.78□□□□□ -1.32
SMARCA1P28370 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMARCA1P28370 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMARCA1P28370 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMARCA1P28370 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMARCA1P28370 OR13C1P-202ENST00000641378 2919 ntBASIC6.78□□□□□ -1.32
SMARCA1P28370 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMARCA1P28370 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SMARCA1P28370 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 WDR95P-201ENST00000425638 1542 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.77□□□□□ -1.33
SMARCA1P28370 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.77□□□□□ -1.33
SMARCA1P28370 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SMARCA1P28370 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 OR52B3P-201ENST00000314715 928 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMARCA1P28370 SNORA63.3-201ENST00000362682 132 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 SNORA72.3-201ENST00000365074 132 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 GNG5P2-201ENST00000372054 207 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AL356968.2-201ENST00000412769 1257 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AK4P4-201ENST00000419465 646 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.77□□□□□ -1.33
SMARCA1P28370 KCTD9P1-201ENST00000430462 1167 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC108751.3-201ENST00000461814 1020 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.77□□□□□ -1.33
SMARCA1P28370 GOLGA5P1-201ENST00000507317 980 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AC006499.4-201ENST00000510947 694 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AC114781.3-201ENST00000512083 142 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AC113192.3-201ENST00000529152 742 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC079148.1-201ENST00000565944 819 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 MIR4260-201ENST00000583107 67 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC100767.2-201ENST00000604840 693 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AL356608.1-201ENST00000610034 820 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AL163051.2-201ENST00000618976 735 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.77□□□□□ -1.33
SMARCA1P28370 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.77□□□□□ -1.33
SMARCA1P28370 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SMARCA1P28370 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMARCA1P28370 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMARCA1P28370 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SMARCA1P28370 AC005725.1-201ENST00000577346 2607 ntBASIC6.77□□□□□ -1.33
SMARCA1P28370 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.77□□□□□ -1.33
SMARCA1P28370 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SMARCA1P28370 AC117409.1-201ENST00000470499 1310 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
SMARCA1P28370 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.76□□□□□ -1.33
SMARCA1P28370 AC110792.3-201ENST00000595906 1614 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 AP001284.1-201ENST00000528393 2118 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.76□□□□□ -1.33
SMARCA1P28370 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SMARCA1P28370 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 MIR421-201ENST00000365696 85 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SMARCA1P28370 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 BX323845.3-201ENST00000428215 527 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 AC073410.1-201ENST00000435125 589 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 RPL23AP19-201ENST00000436229 369 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 AC015983.1-201ENST00000441577 373 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 AL445665.1-202ENST00000452436 324 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 TVP23BP2-201ENST00000455082 615 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 EIF2S2P5-201ENST00000457635 968 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SMARCA1P28370 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SMARCA1P28370 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.76□□□□□ -1.33
SMARCA1P28370 AC090568.1-201ENST00000509499 856 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 SCARNA1-201ENST00000517138 166 ntBASIC6.76□□□□□ -1.33
SMARCA1P28370 SEC11B-201ENST00000518383 499 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 455.1 ms