Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PPATP2-201ENST00000605635 508 ntBASIC5.16□□□□□ -1.58
P04436 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.16□□□□□ -1.58
P04436 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.16□□□□□ -1.58
P04436 AL137246.1-201ENST00000607072 977 ntBASIC5.16□□□□□ -1.58
P04436 AC079395.2-201ENST00000610982 737 ntBASIC5.16□□□□□ -1.58
P04436 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.16□□□□□ -1.58
P04436 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.16□□□□□ -1.58
P04436 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 GVINP1-202ENST00000531871 7271 ntBASIC5.16□□□□□ -1.58
P04436 PWAR1-201ENST00000624188 2414 ntBASIC5.16□□□□□ -1.58
P04436 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.16□□□□□ -1.58
P04436 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.16□□□□□ -1.58
P04436 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P04436 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P04436 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P04436 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
P04436 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.15□□□□□ -1.58
P04436 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
P04436 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P04436 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.15□□□□□ -1.58
P04436 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.15□□□□□ -1.58
P04436 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
P04436 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P04436 AC007068.1-201ENST00000396690 844 ntBASIC5.15□□□□□ -1.59
P04436 OR5W1P-201ENST00000423705 938 ntBASIC5.15□□□□□ -1.59
P04436 AC006335.2-201ENST00000437993 330 ntBASIC5.15□□□□□ -1.59
P04436 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.15□□□□□ -1.59
P04436 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 AC093719.1-201ENST00000480427 441 ntBASIC5.15□□□□□ -1.59
P04436 AC090142.2-201ENST00000483263 416 ntBASIC5.15□□□□□ -1.59
P04436 DUTP7-201ENST00000507982 486 ntBASIC5.15□□□□□ -1.59
P04436 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.15□□□□□ -1.59
P04436 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.15□□□□□ -1.59
P04436 ATP5LP3-201ENST00000514223 304 ntBASIC5.15□□□□□ -1.59
P04436 BX510359.5-201ENST00000515651 304 ntBASIC5.15□□□□□ -1.59
P04436 RN7SKP67-201ENST00000515905 235 ntBASIC5.15□□□□□ -1.59
P04436 SCARNA21.2-201ENST00000516600 166 ntBASIC5.15□□□□□ -1.59
P04436 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.15□□□□□ -1.59
P04436 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.15□□□□□ -1.59
P04436 AL583832.1-201ENST00000603227 784 ntBASIC5.15□□□□□ -1.59
P04436 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 AL035661.1-201ENST00000620459 1144 ntBASIC5.15□□□□□ -1.59
P04436 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P04436 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P04436 CR383656.5-201ENST00000547616 1340 ntBASIC5.15□□□□□ -1.59
P04436 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P04436 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P04436 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P04436 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.15□□□□□ -1.59
P04436 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P04436 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
P04436 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 AL442128.2-201ENST00000620246 1824 ntBASIC5.14□□□□□ -1.59
P04436 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 RN7SKP160-201ENST00000363804 340 ntBASIC5.14□□□□□ -1.59
P04436 RNA5SP132-201ENST00000364725 118 ntBASIC5.14□□□□□ -1.59
P04436 RN7SKP28-201ENST00000364770 305 ntBASIC5.14□□□□□ -1.59
P04436 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 AL121977.1-201ENST00000401636 979 ntBASIC5.14□□□□□ -1.59
P04436 AL391422.1-201ENST00000402155 436 ntBASIC5.14□□□□□ -1.59
P04436 RPS26P38-201ENST00000414476 348 ntBASIC5.14□□□□□ -1.59
P04436 Z93019.1-201ENST00000416450 973 ntBASIC5.14□□□□□ -1.59
P04436 RNF10P1-201ENST00000418589 369 ntBASIC5.14□□□□□ -1.59
P04436 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.14□□□□□ -1.59
P04436 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.14□□□□□ -1.59
P04436 USP24P1-201ENST00000433802 779 ntBASIC5.14□□□□□ -1.59
P04436 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.14□□□□□ -1.59
P04436 AL450023.1-201ENST00000450868 751 ntBASIC5.14□□□□□ -1.59
P04436 SIAH1P1-201ENST00000479411 923 ntBASIC5.14□□□□□ -1.59
P04436 SUMO2P4-201ENST00000504193 276 ntBASIC5.14□□□□□ -1.59
P04436 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.14□□□□□ -1.59
P04436 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
P04436 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.14□□□□□ -1.59
P04436 EIF4EP5-201ENST00000528228 640 ntBASIC5.14□□□□□ -1.59
P04436 PMS2P3-207ENST00000529061 717 ntBASIC5.14□□□□□ -1.59
P04436 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.14□□□□□ -1.59
P04436 AC139697.1-201ENST00000548429 745 ntBASIC5.14□□□□□ -1.59
P04436 HSPE1P2-201ENST00000554777 306 ntBASIC5.14□□□□□ -1.59
P04436 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.14□□□□□ -1.59
P04436 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.14□□□□□ -1.59
P04436 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P04436 MIR6826-201ENST00000617808 98 ntBASIC5.14□□□□□ -1.59
P04436 MIR6886-201ENST00000619864 61 ntBASIC5.14□□□□□ -1.59
P04436 AC021422.1-201ENST00000621212 473 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms