Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 UBA52P7-201ENST00000486088 380 ntBASIC5.42□□□□□ -1.54
TNFP01375 RPS21P4-201ENST00000487122 248 ntBASIC5.42□□□□□ -1.54
TNFP01375 RNA5SP92-201ENST00000516437 110 ntBASIC5.42□□□□□ -1.54
TNFP01375 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.42□□□□□ -1.54
TNFP01375 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 BLZF2P-201ENST00000553776 1130 ntBASIC5.42□□□□□ -1.54
TNFP01375 NPM1P42-201ENST00000560329 862 ntBASIC5.42□□□□□ -1.54
TNFP01375 AC060766.1-201ENST00000590824 627 ntBASIC5.42□□□□□ -1.54
TNFP01375 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.42□□□□□ -1.54
TNFP01375 AC144833.1-201ENST00000567953 4089 ntBASIC5.42□□□□□ -1.54
TNFP01375 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TNFP01375 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TNFP01375 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFP01375 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 AC007159.1-201ENST00000566529 4706 ntBASIC5.41□□□□□ -1.54
TNFP01375 RNA5SP326-201ENST00000363209 110 ntBASIC5.41□□□□□ -1.54
TNFP01375 RNA5SP514-201ENST00000363717 111 ntBASIC5.41□□□□□ -1.54
TNFP01375 RNA5SP335-201ENST00000363817 110 ntBASIC5.41□□□□□ -1.54
TNFP01375 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 AL390774.1-201ENST00000411924 246 ntBASIC5.41□□□□□ -1.54
TNFP01375 METTL15P3-201ENST00000415522 1221 ntBASIC5.41□□□□□ -1.54
TNFP01375 AC007161.1-204ENST00000423039 460 ntBASIC5.41□□□□□ -1.54
TNFP01375 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 PGAM1P13-201ENST00000507497 754 ntBASIC5.41□□□□□ -1.54
TNFP01375 RN7SKP253-201ENST00000516424 309 ntBASIC5.41□□□□□ -1.54
TNFP01375 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TNFP01375 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 AP003789.1-201ENST00000617737 605 ntBASIC5.41□□□□□ -1.54
TNFP01375 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.41□□□□□ -1.54
TNFP01375 AC074101.1-201ENST00000637861 241 ntBASIC5.41□□□□□ -1.54
TNFP01375 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFP01375 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
TNFP01375 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TNFP01375 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
TNFP01375 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TNFP01375 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TNFP01375 C4BPAP1-201ENST00000415474 1893 ntBASIC5.41□□□□□ -1.54
TNFP01375 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
TNFP01375 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFP01375 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFP01375 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
TNFP01375 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TNFP01375 AC005294.1-201ENST00000355509 281 ntBASIC5.4□□□□□ -1.54
TNFP01375 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TNFP01375 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TNFP01375 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFP01375 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
TNFP01375 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 DSTNP5-201ENST00000427921 523 ntBASIC5.4□□□□□ -1.54
TNFP01375 FAM96AP1-201ENST00000430879 482 ntBASIC5.4□□□□□ -1.54
TNFP01375 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFP01375 RPS11P7-201ENST00000442125 465 ntBASIC5.4□□□□□ -1.54
TNFP01375 AC006499.3-201ENST00000506077 748 ntBASIC5.4□□□□□ -1.54
TNFP01375 HIGD1AP14-201ENST00000507617 282 ntBASIC5.4□□□□□ -1.54
TNFP01375 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFP01375 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.4□□□□□ -1.54
TNFP01375 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.4□□□□□ -1.54
TNFP01375 HAUS8P1-201ENST00000549005 542 ntBASIC5.4□□□□□ -1.54
TNFP01375 AC126177.5-201ENST00000549599 178 ntBASIC5.4□□□□□ -1.54
TNFP01375 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.4□□□□□ -1.54
TNFP01375 AP005403.1-201ENST00000579720 229 ntBASIC5.4□□□□□ -1.54
TNFP01375 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFP01375 AC060780.2-201ENST00000589047 198 ntBASIC5.4□□□□□ -1.54
TNFP01375 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.4□□□□□ -1.54
TNFP01375 MIR6719-201ENST00000622428 87 ntBASIC5.4□□□□□ -1.54
TNFP01375 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.4□□□□□ -1.54
TNFP01375 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TNFP01375 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFP01375 AC005225.5-201ENST00000623547 2225 ntBASIC5.4□□□□□ -1.55
TNFP01375 AC007998.4-201ENST00000612496 2533 ntBASIC5.4□□□□□ -1.55
TNFP01375 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFP01375 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TNFP01375 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.4□□□□□ -1.55
TNFP01375 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.39□□□□□ -1.55
TNFP01375 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TNFP01375 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms