Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.78□□□□□ -1.32
MBD4O95243 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 RNU6-697P-201ENST00000363348 107 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AL133173.1-201ENST00000423458 397 ntBASIC6.78□□□□□ -1.32
MBD4O95243 CYCSP51-201ENST00000443545 318 ntBASIC6.78□□□□□ -1.32
MBD4O95243 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.78□□□□□ -1.32
MBD4O95243 MEMO1P4-201ENST00000453590 386 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AL356390.1-201ENST00000455684 397 ntBASIC6.78□□□□□ -1.32
MBD4O95243 RN7SL466P-201ENST00000497546 295 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.78□□□□□ -1.32
MBD4O95243 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.78□□□□□ -1.32
MBD4O95243 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.78□□□□□ -1.32
MBD4O95243 NPM1P42-201ENST00000560329 862 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.78□□□□□ -1.32
MBD4O95243 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.78□□□□□ -1.32
MBD4O95243 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.78□□□□□ -1.32
MBD4O95243 AL589674.2-201ENST00000604304 337 ntBASIC6.78□□□□□ -1.32
MBD4O95243 HIRAP1-201ENST00000605318 787 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AC009120.7-201ENST00000623452 780 ntBASIC6.78□□□□□ -1.32
MBD4O95243 AL691477.1-201ENST00000624398 162 ntBASIC6.78□□□□□ -1.32
MBD4O95243 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
MBD4O95243 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 AC018628.1-201ENST00000624147 3819 ntBASIC6.78□□□□□ -1.32
MBD4O95243 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
MBD4O95243 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.32
MBD4O95243 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
MBD4O95243 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.77□□□□□ -1.33
MBD4O95243 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 SNORA51.1-201ENST00000363243 140 ntBASIC6.77□□□□□ -1.33
MBD4O95243 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.77□□□□□ -1.33
MBD4O95243 RAB9AP4-201ENST00000415230 609 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AL392003.1-201ENST00000434394 243 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AL390119.1-201ENST00000440329 312 ntBASIC6.77□□□□□ -1.33
MBD4O95243 DNAJC19P5-201ENST00000443295 316 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.77□□□□□ -1.33
MBD4O95243 AL450996.1-201ENST00000445574 1202 ntBASIC6.77□□□□□ -1.33
MBD4O95243 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.77□□□□□ -1.33
MBD4O95243 AL136038.1-201ENST00000497246 351 ntBASIC6.77□□□□□ -1.33
MBD4O95243 RFPL4AP3-201ENST00000515267 345 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.77□□□□□ -1.33
MBD4O95243 MRPS21P7-201ENST00000566937 238 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.77□□□□□ -1.33
MBD4O95243 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.77□□□□□ -1.33
MBD4O95243 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.77□□□□□ -1.33
MBD4O95243 AL138960.1-201ENST00000613838 513 ntBASIC6.77□□□□□ -1.33
MBD4O95243 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 MIR6886-201ENST00000619864 61 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AC007683.2-201ENST00000624681 714 ntBASIC6.77□□□□□ -1.33
MBD4O95243 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
MBD4O95243 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.77□□□□□ -1.33
MBD4O95243 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
MBD4O95243 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.77□□□□□ -1.33
MBD4O95243 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MBD4O95243 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.76□□□□□ -1.33
MBD4O95243 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
MBD4O95243 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.76□□□□□ -1.33
MBD4O95243 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MBD4O95243 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MBD4O95243 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.76□□□□□ -1.33
MBD4O95243 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.76□□□□□ -1.33
MBD4O95243 AL121776.1-201ENST00000429337 372 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.76□□□□□ -1.33
MBD4O95243 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.76□□□□□ -1.33
MBD4O95243 AC012075.1-201ENST00000436549 580 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AL590399.4-201ENST00000436561 601 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.76□□□□□ -1.33
MBD4O95243 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.76□□□□□ -1.33
MBD4O95243 AL450023.1-201ENST00000450868 751 ntBASIC6.76□□□□□ -1.33
MBD4O95243 VDAC2P4-201ENST00000452925 711 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.76□□□□□ -1.33
MBD4O95243 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.76□□□□□ -1.33
MBD4O95243 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.76□□□□□ -1.33
MBD4O95243 RBM22P12-201ENST00000567098 1255 ntBASIC6.76□□□□□ -1.33
MBD4O95243 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms