Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL138693.1-201ENST00000622219 129 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC188H7C350 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 NAMPTP1-201ENST00000440465 2514 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC100757.1-201ENST00000616872 1835 ntBASIC5.83□□□□□ -1.48
CCDC188H7C350 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC188H7C350 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC188H7C350 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC188H7C350 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 PDZK1P1-202ENST00000425209 1350 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 PWAR1-201ENST00000624188 2414 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 SNORD56.6-201ENST00000384569 71 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 YWHAZP6-201ENST00000399764 738 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 PPIAP9-201ENST00000403866 498 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 RN7SKP38-201ENST00000410782 309 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 HSPD1P12-201ENST00000429127 1069 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC007679.3-201ENST00000434035 414 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 AC016772.1-201ENST00000444170 1261 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 HMGB1P7-201ENST00000450921 612 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 CFL1P4-201ENST00000451536 498 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 RPL9P15-201ENST00000491096 532 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 RPS27P20-201ENST00000492051 246 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 AL049874.2-201ENST00000492636 288 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AL158068.1-201ENST00000506116 616 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 SCARNA18.1-201ENST00000516330 83 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC188H7C350 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 TRIM51DP-201ENST00000529746 596 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC188H7C350 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC008507.3-201ENST00000585753 472 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 WBP1LP12-201ENST00000604449 331 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC188H7C350 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 MIR6813-201ENST00000621638 56 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 FRG1EP-201ENST00000634469 770 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 AP005435.3-201ENST00000531260 3198 ntBASIC5.82□□□□□ -1.48
CCDC188H7C350 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
CCDC188H7C350 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC188H7C350 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL078621.3-201ENST00000623707 2042 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC011755.1-201ENST00000623763 2049 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 GAPDHP24-201ENST00000328713 983 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL034417.1-201ENST00000399343 800 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 RN7SKP146-201ENST00000410242 334 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL034379.1-201ENST00000423216 253 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC188H7C350 OR52E7P-201ENST00000452394 933 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AL358876.1-201ENST00000453364 1075 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms