Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC090181.3-201ENST00000624777 1514 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC104966.1-201ENST00000467010 1464 ntBASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV7S3A2A0A539 AC110716.2-201ENST00000563865 3945 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MTND4P9-201ENST00000507819 1346 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL159987.1-201ENST00000347911 293 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 SEPT7P8-201ENST00000413308 775 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RAB9AP4-201ENST00000415230 609 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL158827.1-201ENST00000416300 391 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 BX284632.2-201ENST00000421091 399 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL354692.1-201ENST00000423044 315 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RNF19BPX-201ENST00000426224 625 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 BX323845.3-201ENST00000428215 527 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL512605.1-202ENST00000441919 381 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RPL6P30-201ENST00000443382 862 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL359955.2-201ENST00000445380 353 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 PPIAP27-201ENST00000453800 265 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC108751.3-201ENST00000461814 1020 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC073610.1-201ENST00000489971 396 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC092349.1-201ENST00000504903 310 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RN7SKP157-201ENST00000516174 282 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MTND1P6-201ENST00000523621 946 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 PCNAP4-201ENST00000532690 730 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AP001496.3-201ENST00000580230 913 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC090236.2-201ENST00000587933 1101 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 NANOGP3-201ENST00000605855 286 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL450270.1-201ENST00000606160 391 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AP001437.1-201ENST00000608783 456 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 MIR6793-201ENST00000612376 63 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL031658.2-201ENST00000616850 651 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AC245014.3-201ENST00000618589 347 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL163051.2-201ENST00000618976 735 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 AL049777.1-201ENST00000622740 518 ntBASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TCRBV7S3A2A0A539 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 HSPD1P7-201ENST00000447985 1686 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RAB5CP1-201ENST00000395972 580 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ST13P16-201ENST00000401760 781 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL355143.1-201ENST00000407101 841 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF965P-201ENST00000432501 817 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 NDUFS5P5-201ENST00000437256 321 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 EIF5AP4-201ENST00000441206 465 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 XKRY2-201ENST00000442362 1093 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 TIMM8BP2-201ENST00000445940 251 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 EEF1B2P3-201ENST00000447718 678 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RAB28P3-201ENST00000448325 597 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 CFL1P4-201ENST00000451536 498 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC078857.1-201ENST00000469870 667 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RPSAP37-201ENST00000470913 821 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RPL32P33-201ENST00000487023 394 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 782.5 ms