Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 RN7SKP33-201ENST00000410942 340 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 NENFP1-201ENST00000419476 466 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL022400.1-201ENST00000423946 935 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 CNOT7P2-201ENST00000441051 832 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL161626.1-201ENST00000441480 490 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 RPL7P18-201ENST00000478965 734 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC107398.1-201ENST00000486904 505 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 MED28P5-201ENST00000528254 438 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 NXPE2P1-201ENST00000543705 726 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC007954.1-201ENST00000554198 494 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC079171.1-201ENST00000568788 914 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC090616.1-201ENST00000583895 447 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC091805.2-201ENST00000603848 235 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL645933.2-201ENST00000606743 1207 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC012640.3-201ENST00000607847 430 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC025594.3-201ENST00000613068 790 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC072046.2-201ENST00000618366 268 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 TCL6_3.1-201ENST00000619064 137 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AL354718.1-201ENST00000619764 589 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC104985.2-201ENST00000620598 500 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 SEPT14P19-203ENST00000633205 211 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 PCMTD1P7-201ENST00000634506 357 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC099654.12-201ENST00000639868 649 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 AC110373.1-201ENST00000505994 3505 ntBASIC6.83□□□□□ -1.32
SSU72Q9NP77 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SSU72Q9NP77 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SSU72Q9NP77 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 MTCO1P25-201ENST00000414449 1799 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 PSG10P-201ENST00000501199 1500 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 ABCA11P-202ENST00000504019 2110 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 OR4G2P-201ENST00000328113 903 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 RNA5SP27-201ENST00000363839 119 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 RNA5SP396-201ENST00000364834 120 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 OR1L1-202ENST00000373686 1083 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 RNA5SP251-201ENST00000410614 137 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 CEACAMP8-201ENST00000413902 580 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 Z99497.1-201ENST00000421282 135 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC000362.1-201ENST00000433725 425 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AL137845.2-201ENST00000444292 988 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 ST13P20-201ENST00000447996 1065 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC083806.1-201ENST00000468934 316 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 UGT2A3P7-201ENST00000510485 734 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 RNA5SP422-201ENST00000516778 111 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 IGHV3-57-201ENST00000520143 280 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 IGLVV-66-201ENST00000523818 341 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms