Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL035405.1-201ENST00000400795 710 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 NPM1P37-201ENST00000403105 874 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC104843.2-201ENST00000427666 297 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC023141.3-201ENST00000436698 278 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 ATP5LP2-201ENST00000440646 311 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 TXNP2-201ENST00000443918 295 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 FTLP8-201ENST00000446770 267 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 SETP20-201ENST00000457046 852 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC108751.3-201ENST00000461814 1020 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC104109.1-201ENST00000498563 436 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC011411.1-201ENST00000509592 876 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 KCTD9P6-201ENST00000522306 950 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AP000619.2-201ENST00000546014 969 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC125612.1-201ENST00000547580 377 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 NPM1P5-201ENST00000557228 838 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 OR1AB1P-201ENST00000585564 761 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC016597.2-201ENST00000613256 341 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC004801.6-201ENST00000616571 978 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL512652.1-201ENST00000619006 500 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC022960.3-201ENST00000619794 441 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 CASC19-260ENST00000641828 2001 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 RNU1-134P-201ENST00000362935 165 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL353625.1-202ENST00000366273 571 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 RPS3P2-201ENST00000421346 701 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC066692.1-201ENST00000421721 457 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 NMD3P2-201ENST00000421815 761 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 IPPKP1-201ENST00000422501 768 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC073310.1-201ENST00000423226 1033 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 RNA5SP271-201ENST00000516700 88 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.13□□□□□ -1.43
USP29Q9HBJ7 AC005000.1-201ENST00000536192 288 ntBASIC6.13□□□□□ -1.43
USP29Q9HBJ7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms