Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU2-47P-201ENST00000410649 186 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL355863.1-201ENST00000424331 293 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 RPS7P14-201ENST00000426405 583 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL035417.1-201ENST00000442754 214 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL451081.2-201ENST00000448115 933 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 OR2AI1P-201ENST00000448534 932 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC091685.2-201ENST00000454924 864 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC117394.1-201ENST00000477323 567 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 RN7SL107P-201ENST00000478127 283 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL135752.1-201ENST00000479477 471 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AF213884.1-201ENST00000488102 463 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 RN7SL130P-201ENST00000489463 305 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 RN7SL598P-201ENST00000494391 294 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 OR7E163P-201ENST00000505943 894 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 HMGB3P15-201ENST00000507326 574 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 PTP4A1P4-201ENST00000512479 322 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC026801.2-201ENST00000515352 425 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 RN7SKP197-201ENST00000517077 297 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC063950.1-201ENST00000552036 308 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC090312.2-201ENST00000582687 378 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 MIR4314-201ENST00000583321 92 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL512605.2-201ENST00000592972 256 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL109918.3-201ENST00000603072 338 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL031281.2-201ENST00000606754 748 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC092807.2-201ENST00000609367 243 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC023509.5-201ENST00000617434 807 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AC011483.4-201ENST00000623621 585 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 AL590396.3-201ENST00000636334 300 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 NUP58P1-201ENST00000502546 1738 ntBASIC7.54□□□□□ -1.2
USB1Q9BQ65 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.54□□□□□ -1.2
USB1Q9BQ65 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USB1Q9BQ65 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 MAPK10-333ENST00000641607 2481 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 OR4F7P-201ENST00000402444 931 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 OR4F1P-201ENST00000405102 938 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 PMS2P9-201ENST00000441237 515 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 TCEA1P1-201ENST00000449716 880 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 PMS2P11-201ENST00000451831 574 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 RN7SL263P-201ENST00000467969 290 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 RN7SL685P-201ENST00000476271 298 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 RPS27P23-201ENST00000487608 251 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AL035404.1-201ENST00000497982 568 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 EIF4EP3-201ENST00000498782 656 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms