Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RPL34P3-201ENST00000421454 338 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 DEFB109A-201ENST00000482450 265 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 OR7E157P-201ENST00000494376 911 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 CYCSP22-201ENST00000517555 339 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC063977.5-201ENST00000601044 974 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC090607.5-201ENST00000615692 224 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC087565.3-203ENST00000641018 837 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 MIR193BHG-214ENST00000641765 509 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 CR383656.5-201ENST00000547616 1340 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 KYNUP3-201ENST00000574386 1341 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS35Q96QK1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 AC144833.1-201ENST00000567953 4089 ntBASIC5.68□□□□□ -1.5
VPS35Q96QK1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS35Q96QK1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 SNORA64.1-201ENST00000362600 132 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AL031985.1-201ENST00000392713 418 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 NACAP7-201ENST00000407371 609 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 SDHDP6-201ENST00000414693 480 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 RNGTTP1-201ENST00000420965 728 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 LRRC37A14P-201ENST00000452297 462 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 MEMO1P4-201ENST00000453590 386 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 MORF4L2P1-201ENST00000503761 858 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 RNU6-615P-201ENST00000516065 106 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC010547.6-201ENST00000571789 193 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 MIR3614-201ENST00000581261 86 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC008521.2-201ENST00000591021 259 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 OR51C1P-201ENST00000608504 942 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 Z95327.3-201ENST00000610385 572 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS35Q96QK1 TCP11X1-202ENST00000622971 1372 ntBASIC5.67□□□□□ -1.5
VPS35Q96QK1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VPS35Q96QK1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS35Q96QK1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS35Q96QK1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS35Q96QK1 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS35Q96QK1 AL603750.1-201ENST00000624216 1717 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS35Q96QK1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 RNA5SP30-201ENST00000365552 115 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 NENFP1-201ENST00000419476 466 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 AC113412.1-201ENST00000425840 504 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 BX119321.1-201ENST00000428912 797 ntBASIC5.66□□□□□ -1.5
VPS35Q96QK1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS35Q96QK1 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms