Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC022336.1-201ENST00000475510 337 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC006539.1-201ENST00000481419 501 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC005017.1-201ENST00000482002 490 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RPL29P23-201ENST00000486188 442 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AP002453.1-201ENST00000492327 668 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC015864.1-201ENST00000496512 544 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 Y_RNA.717-201ENST00000517106 92 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC116917.1-201ENST00000520558 305 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC136777.2-201ENST00000522979 358 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC104115.2-201ENST00000523026 687 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC107993.1-201ENST00000591343 684 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL513327.3-201ENST00000602618 469 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL049840.6-201ENST00000604583 345 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL133481.2-203ENST00000607558 139 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL096803.3-201ENST00000609032 532 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC140725.3-201ENST00000616193 880 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL591135.1-201ENST00000401578 5914 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC140134.1-201ENST00000511830 3544 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ATG4AQ8WYN0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ATG4AQ8WYN0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC008627.1-201ENST00000517511 1704 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 YWHAZP6-201ENST00000399764 738 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 VN1R51P-201ENST00000411675 945 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 METTL15P3-201ENST00000415522 1221 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 RPS4XP5-201ENST00000419038 768 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 GAPDHP75-201ENST00000433910 943 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL445928.1-201ENST00000435545 222 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 RN7SL269P-201ENST00000467795 305 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL157777.1-201ENST00000468100 304 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 RN7SL205P-201ENST00000490174 284 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 RBBP4P1-201ENST00000502424 1276 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 RNU6-319P-201ENST00000516025 108 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC106730.2-201ENST00000566641 540 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 MT1CP-201ENST00000567054 174 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL078601.3-201ENST00000573303 535 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 MTATP6P24-201ENST00000576835 677 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC068768.2-201ENST00000602352 343 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC009237.12-201ENST00000604755 742 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL121652.1-201ENST00000608851 448 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC015819.1-201ENST00000613588 663 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 uc_338.29-201ENST00000615099 168 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 MIR1264-201ENST00000616374 69 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AL445670.1-201ENST00000618889 801 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC007275.1-201ENST00000621243 671 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC073488.3-201ENST00000631611 778 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 OR11H2-202ENST00000641517 1085 ntBASIC6.08□□□□□ -1.44
ATG4AQ8WYN0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms