Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AL163952.1-202ENST00000569625 600 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 OR7A8P-201ENST00000595427 913 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 AL513327.3-201ENST00000602618 469 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 FAM72A-208ENST00000607379 1139 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 MIR6768-201ENST00000610734 72 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 CU639417.4-201ENST00000623928 207 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 LINC02019-201ENST00000608605 2060 ntBASIC5.08□□□□□ -1.6
FNDC9Q8TBE3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RNA5SP131-201ENST00000365452 119 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RNA5SP91-201ENST00000390902 119 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 U3.25-201ENST00000391209 220 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 VN1R21P-201ENST00000426703 765 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AL121776.1-201ENST00000429337 372 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RSU1P1-201ENST00000453416 441 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RN7SL466P-201ENST00000497546 295 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 RNA5SP362-201ENST00000516048 118 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC126615.2-201ENST00000553003 515 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC060780.2-201ENST00000589047 198 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AL589674.2-201ENST00000604304 337 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC007683.2-201ENST00000624681 714 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 AC079776.5-201ENST00000641920 211 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 MTCO1P11-201ENST00000429111 1528 ntBASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FNDC9Q8TBE3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC114774.1-201ENST00000507410 1770 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 MIR133A2-201ENST00000347538 102 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 U3.10-201ENST00000364459 214 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL354766.1-201ENST00000423396 542 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 BX276092.6-201ENST00000430476 250 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL450996.1-201ENST00000445574 1202 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 BX276092.8-201ENST00000455722 250 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 HMGN2P47-201ENST00000559378 272 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 RBM22P12-201ENST00000567098 1255 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL133481.2-203ENST00000607558 139 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC016745.2-201ENST00000608834 3443 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AL034546.1-201ENST00000623740 3693 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 AC027279.4-201ENST00000624371 2072 ntBASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FNDC9Q8TBE3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FNDC9Q8TBE3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms