Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 GAPDHP24-201ENST00000328713 983 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 RNA5SP394-201ENST00000364216 119 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 EEF1B2P8-201ENST00000414101 671 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 BX119904.3-201ENST00000428194 957 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AL596266.1-201ENST00000448132 400 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 LRRC37A14P-201ENST00000452297 462 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 MRE11P1-201ENST00000464884 2127 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 RN7SKP253-201ENST00000516424 309 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 IGKV2-4-201ENST00000523070 340 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC122688.1-201ENST00000541494 223 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC027279.4-201ENST00000624371 2072 ntBASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC65Q8IXS2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AL009179.1-201ENST00000406085 265 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 RPS3P2-201ENST00000421346 701 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC138761.5-201ENST00000433967 325 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC006335.2-201ENST00000437993 330 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 H3F3BP2-201ENST00000583907 357 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC100767.2-201ENST00000604840 693 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AL359742.1-201ENST00000622497 540 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 MIR1910-201ENST00000636955 80 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 MIR193BHG-214ENST00000641765 509 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 AL360270.2-201ENST00000562952 5985 ntBASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC65Q8IXS2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 RPS2P45-201ENST00000469997 2057 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC068870.1-201ENST00000563737 2455 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 SAMM50P1-201ENST00000455403 1399 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AP000473.2-201ENST00000602659 1537 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 RN7SKP185-201ENST00000362813 326 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 RNA5SP131-201ENST00000365452 119 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC113412.1-201ENST00000425840 504 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 FTLP19-201ENST00000433300 394 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC099670.2-201ENST00000435130 321 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 LINC02210-201ENST00000444561 288 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC005297.1-201ENST00000444765 862 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 NPM1P28-201ENST00000492269 840 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 CYCSP22-201ENST00000517555 339 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 OR5AM1P-201ENST00000532136 1032 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 NDUFA5P11-201ENST00000567995 343 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 MT-RNR2-201ENST00000387347 1559 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms