Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 LINC01963-201ENST00000562038 3148 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 CDY3P-201ENST00000454543 1618 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AL022311.1-201ENST00000623726 19416 ntBASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.73□□□□□ -1.49
CDKL3Q8IVW4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC018809.2-201ENST00000602436 3823 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 LINC02019-201ENST00000608605 2060 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 SNORD56.6-201ENST00000384569 71 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 PCNPP2-201ENST00000441651 455 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AL358876.1-201ENST00000453364 1075 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AZGP1P2-201ENST00000454506 345 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 RN7SL583P-201ENST00000475692 287 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 RNA5SP271-201ENST00000516700 88 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 TRIM51DP-201ENST00000529746 596 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 TOMM20P1-201ENST00000534518 427 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC107958.1-201ENST00000556576 290 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AC129915.3-201ENST00000634128 948 ntBASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDKL3Q8IVW4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.71□□□□□ -1.49
CDKL3Q8IVW4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDKL3Q8IVW4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.71□□□□□ -1.49
CDKL3Q8IVW4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 OR7E25P-201ENST00000344844 931 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 HMGB1P20-201ENST00000402555 677 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC011476.1-201ENST00000466725 307 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 RNU6-615P-201ENST00000516065 106 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC079064.1-201ENST00000528365 362 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 OR4A43P-201ENST00000532938 908 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AP001496.3-201ENST00000580230 913 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MIR7853-201ENST00000584820 132 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC107993.1-201ENST00000591343 684 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC010632.3-201ENST00000611377 369 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC025574.2-201ENST00000615621 514 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MIR6071-201ENST00000616741 78 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MRE11P1-201ENST00000464884 2127 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AL359715.3-201ENST00000569267 2123 ntBASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDKL3Q8IVW4 AC016745.2-201ENST00000608834 3443 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 OR52B3P-201ENST00000314715 928 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms