Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 TET1P1-201ENST00000426627 2301 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 FBXL21-201ENST00000297158 1305 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AP000473.2-201ENST00000602659 1537 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 RN7SKP160-201ENST00000363804 340 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 RN7SKP124-201ENST00000364730 341 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 PEX12P1-201ENST00000400284 1048 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL445213.1-201ENST00000412589 747 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL354766.1-201ENST00000423396 542 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL365220.1-201ENST00000432923 399 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL450996.1-201ENST00000445574 1202 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC004129.2-201ENST00000457229 287 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC087672.1-201ENST00000479876 766 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC006539.1-201ENST00000481419 501 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 RNA5SP362-201ENST00000516048 118 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC090424.1-201ENST00000535243 736 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC090022.1-201ENST00000546569 311 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AL163952.1-202ENST00000569625 600 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AP001357.1-201ENST00000586304 1053 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 LSM1P2-201ENST00000604911 322 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC008115.3-201ENST00000614874 549 ntBASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3F3CQ6NXT2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 KYNUP3-201ENST00000574386 1341 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AL034546.1-201ENST00000623740 3693 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AL391361.1-201ENST00000405580 489 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 GAPDHP42-201ENST00000406848 981 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 OR6E1P-201ENST00000414424 923 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 NENFP1-201ENST00000419476 466 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC013268.2-201ENST00000420753 337 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 OSTCP1-201ENST00000455507 450 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 TRBV5-2-201ENST00000489095 273 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 RN7SL284P-201ENST00000498823 275 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC026782.2-201ENST00000510845 636 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 TOMM22P4-201ENST00000511318 336 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC136777.2-201ENST00000522979 358 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC025857.2-201ENST00000602711 238 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC002069.2-201ENST00000603580 883 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 AC004158.1-201ENST00000564508 4319 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 MFSD8-219ENST00000641228 2559 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 UGT2B24P-201ENST00000514441 1597 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 MRE11P1-201ENST00000464884 2127 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 BCORP1-203ENST00000513194 5093 ntBASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.29□□□□□ -1.56
H3F3CQ6NXT2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3CQ6NXT2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms