Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AL450270.1-201ENST00000606160 391 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL008723.3-201ENST00000608926 449 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AL683826.1-201ENST00000624104 627 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC073592.6-201ENST00000624271 415 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 MAPK10-328ENST00000641553 4009 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AP001002.1-201ENST00000625148 1513 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPS3AP61247 RNU1-65P-201ENST00000363919 148 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 RNU6-31P-201ENST00000384388 108 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MIR1275-201ENST00000408770 80 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 SNORA79B-201ENST00000410557 148 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.66□□□□□ -1.5
RPS3AP61247 RPA2P2-201ENST00000419698 796 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC016027.5-201ENST00000427227 210 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC094019.1-201ENST00000434678 472 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 AC006326.1-201ENST00000445465 787 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MORF4-201ENST00000447135 971 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.66□□□□□ -1.5
RPS3AP61247 RARRES2P3-201ENST00000457739 473 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.66□□□□□ -1.5
RPS3AP61247 AL049829.1-201ENST00000465411 156 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC079080.1-201ENST00000479841 822 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 SUMO1P1-201ENST00000497904 306 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC106822.1-201ENST00000502647 526 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC095052.1-201ENST00000509955 863 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.66□□□□□ -1.5
RPS3AP61247 ZNF519P4-201ENST00000514008 125 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 RN7SKP70-201ENST00000516655 271 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 IGHV3-63-201ENST00000518422 341 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 NOP56P3-201ENST00000549457 385 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC107958.1-201ENST00000556576 290 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC002310.3-201ENST00000569728 723 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MIR3189-201ENST00000578735 73 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MIR3908-201ENST00000579798 126 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MIR4660-201ENST00000583549 74 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 KATNBL1P5-201ENST00000605015 517 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RPS3AP61247 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC111152.1-202ENST00000635848 339 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC073869.7-201ENST00000640874 297 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 AC116667.2-201ENST00000641075 823 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 AC092692.1-201ENST00000623625 2595 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RPS3AP61247 UGT2B26P-201ENST00000508672 1613 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
RPS3AP61247 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 AL512283.1-201ENST00000606756 1384 ntBASIC5.66□□□□□ -1.5
RPS3AP61247 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPS3AP61247 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RPS3AP61247 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 MT-RNR2-201ENST00000387347 1559 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms