Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.43□□□□□ -1.54
VSX2P58304 AL034546.1-201ENST00000623740 3693 ntBASIC5.43□□□□□ -1.54
VSX2P58304 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VSX2P58304 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VSX2P58304 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VSX2P58304 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VSX2P58304 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.42□□□□□ -1.54
VSX2P58304 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VSX2P58304 AL121977.1-201ENST00000401636 979 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 OR6E1P-201ENST00000414424 923 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AL513325.1-201ENST00000417716 1034 ntBASIC5.42□□□□□ -1.54
VSX2P58304 REREP1Y-201ENST00000422655 198 ntBASIC5.42□□□□□ -1.54
VSX2P58304 CHEK2P5-201ENST00000423877 246 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC113412.1-201ENST00000425840 504 ntBASIC5.42□□□□□ -1.54
VSX2P58304 FMO7P-201ENST00000436045 768 ntBASIC5.42□□□□□ -1.54
VSX2P58304 REREP2Y-201ENST00000439103 200 ntBASIC5.42□□□□□ -1.54
VSX2P58304 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 RPL12P39-201ENST00000455456 496 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.42□□□□□ -1.54
VSX2P58304 RPS27AP2-201ENST00000457576 465 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC023141.9-201ENST00000458734 412 ntBASIC5.42□□□□□ -1.54
VSX2P58304 RPSAP39-201ENST00000467439 883 ntBASIC5.42□□□□□ -1.54
VSX2P58304 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.42□□□□□ -1.54
VSX2P58304 AC106872.4-201ENST00000510050 523 ntBASIC5.42□□□□□ -1.54
VSX2P58304 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.42□□□□□ -1.54
VSX2P58304 AC136777.2-201ENST00000522979 358 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
VSX2P58304 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 AC126615.2-201ENST00000553003 515 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AGGF1P7-201ENST00000562369 913 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.42□□□□□ -1.54
VSX2P58304 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.42□□□□□ -1.54
VSX2P58304 FO393422.1-201ENST00000603908 708 ntBASIC5.42□□□□□ -1.54
VSX2P58304 AC241377.1-201ENST00000619797 406 ntBASIC5.42□□□□□ -1.54
VSX2P58304 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
VSX2P58304 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VSX2P58304 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VSX2P58304 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 AC120036.2-201ENST00000509729 1474 ntBASIC5.41□□□□□ -1.54
VSX2P58304 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VSX2P58304 RNA5SP30-201ENST00000365552 115 ntBASIC5.41□□□□□ -1.54
VSX2P58304 U3.23-201ENST00000391132 200 ntBASIC5.41□□□□□ -1.54
VSX2P58304 RPL11P3-201ENST00000395256 523 ntBASIC5.41□□□□□ -1.54
VSX2P58304 BMS1P17-202ENST00000416720 316 ntBASIC5.41□□□□□ -1.54
VSX2P58304 DPPA2P2-201ENST00000418220 897 ntBASIC5.41□□□□□ -1.54
VSX2P58304 NENFP1-201ENST00000419476 466 ntBASIC5.41□□□□□ -1.54
VSX2P58304 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.41□□□□□ -1.54
VSX2P58304 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.41□□□□□ -1.54
VSX2P58304 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.41□□□□□ -1.54
VSX2P58304 AL450996.1-201ENST00000445574 1202 ntBASIC5.41□□□□□ -1.54
VSX2P58304 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.41□□□□□ -1.54
VSX2P58304 AC074087.1-201ENST00000512059 724 ntBASIC5.41□□□□□ -1.54
VSX2P58304 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.41□□□□□ -1.54
VSX2P58304 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.41□□□□□ -1.54
VSX2P58304 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.41□□□□□ -1.54
VSX2P58304 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 HSPE1P2-201ENST00000554777 306 ntBASIC5.41□□□□□ -1.54
VSX2P58304 NPM1P42-201ENST00000560329 862 ntBASIC5.41□□□□□ -1.54
VSX2P58304 AC025857.2-201ENST00000602711 238 ntBASIC5.41□□□□□ -1.54
VSX2P58304 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 AL035661.1-201ENST00000620459 1144 ntBASIC5.41□□□□□ -1.54
VSX2P58304 AL691477.1-201ENST00000624398 162 ntBASIC5.41□□□□□ -1.54
VSX2P58304 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.41□□□□□ -1.54
VSX2P58304 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VSX2P58304 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.41□□□□□ -1.54
VSX2P58304 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
VSX2P58304 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VSX2P58304 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.41□□□□□ -1.54
VSX2P58304 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VSX2P58304 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
VSX2P58304 PWAR1-201ENST00000624188 2414 ntBASIC5.4□□□□□ -1.54
VSX2P58304 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VSX2P58304 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VSX2P58304 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 BCORP1-203ENST00000513194 5093 ntBASIC5.4□□□□□ -1.54
VSX2P58304 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VSX2P58304 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 RNA5SP131-201ENST00000365452 119 ntBASIC5.4□□□□□ -1.54
VSX2P58304 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.4□□□□□ -1.54
VSX2P58304 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms