Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 OR3D1P-201ENST00000438288 955 ntBASIC6.28□□□□□ -1.4
COPAP53621 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.28□□□□□ -1.4
COPAP53621 AC073109.1-201ENST00000445066 978 ntBASIC6.28□□□□□ -1.4
COPAP53621 OR2AF1P-201ENST00000454899 889 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.28□□□□□ -1.4
COPAP53621 AC010374.2-201ENST00000512933 535 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 RNA5SP434-201ENST00000516647 121 ntBASIC6.28□□□□□ -1.4
COPAP53621 SNORA76.2-201ENST00000517095 137 ntBASIC6.28□□□□□ -1.4
COPAP53621 IGKV2-19-201ENST00000518132 283 ntBASIC6.28□□□□□ -1.4
COPAP53621 IGLVIV-64-201ENST00000518581 301 ntBASIC6.28□□□□□ -1.4
COPAP53621 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 AC007956.1-201ENST00000555623 542 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.28□□□□□ -1.4
COPAP53621 AC009120.3-201ENST00000563335 499 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC104072.1-201ENST00000568817 668 ntBASIC6.28□□□□□ -1.4
COPAP53621 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
COPAP53621 BNIP3P40-201ENST00000596017 556 ntBASIC6.28□□□□□ -1.4
COPAP53621 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
COPAP53621 AC009237.12-201ENST00000604755 742 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC025016.1-201ENST00000616746 682 ntBASIC6.28□□□□□ -1.4
COPAP53621 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 AC017002.4-201ENST00000604721 1525 ntBASIC6.28□□□□□ -1.4
COPAP53621 AC092724.1-201ENST00000624623 3397 ntBASIC6.28□□□□□ -1.4
COPAP53621 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COPAP53621 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
COPAP53621 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
COPAP53621 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COPAP53621 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COPAP53621 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 AC125336.1-201ENST00000508893 2827 ntBASIC6.27□□□□□ -1.41
COPAP53621 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 RNA5SP477-201ENST00000362639 119 ntBASIC6.27□□□□□ -1.41
COPAP53621 RNU1-134P-201ENST00000362935 165 ntBASIC6.27□□□□□ -1.41
COPAP53621 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.27□□□□□ -1.41
COPAP53621 CYP4F30P-202ENST00000420048 405 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 AC108751.3-201ENST00000461814 1020 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC018635.1-201ENST00000468292 1030 ntBASIC6.27□□□□□ -1.41
COPAP53621 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.27□□□□□ -1.41
COPAP53621 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 Y_RNA.710-201ENST00000516975 110 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC103833.1-201ENST00000517442 172 ntBASIC6.27□□□□□ -1.41
COPAP53621 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.27□□□□□ -1.41
COPAP53621 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC005242.1-201ENST00000585658 438 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.27□□□□□ -1.41
COPAP53621 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 MTATP6P2-201ENST00000603319 678 ntBASIC6.27□□□□□ -1.41
COPAP53621 RPAP2P1-201ENST00000603626 1168 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC100767.2-201ENST00000604840 693 ntBASIC6.27□□□□□ -1.41
COPAP53621 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.27□□□□□ -1.41
COPAP53621 MIR6729-201ENST00000618194 65 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC022960.3-201ENST00000619794 441 ntBASIC6.27□□□□□ -1.41
COPAP53621 AL049777.1-201ENST00000622740 518 ntBASIC6.27□□□□□ -1.41
COPAP53621 AC073488.3-201ENST00000631611 778 ntBASIC6.27□□□□□ -1.41
COPAP53621 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 AP002512.4-202ENST00000641599 4530 ntBASIC6.27□□□□□ -1.41
COPAP53621 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.27□□□□□ -1.41
COPAP53621 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COPAP53621 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COPAP53621 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COPAP53621 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms