Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AC137627.1-201ENST00000545761 289 ntBASIC5.97□□□□□ -1.45
LHX1P48742 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.97□□□□□ -1.45
LHX1P48742 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 H3F3BP2-201ENST00000583907 357 ntBASIC5.97□□□□□ -1.45
LHX1P48742 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
LHX1P48742 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AC109309.2-201ENST00000612597 332 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC025574.2-201ENST00000615621 514 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC243960.7-201ENST00000623532 707 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC132068.1-201ENST00000623805 459 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.97□□□□□ -1.45
LHX1P48742 AC063952.1-203ENST00000634410 658 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
LHX1P48742 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.96□□□□□ -1.45
LHX1P48742 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
LHX1P48742 MAPK10-261ENST00000641050 3109 ntBASIC5.96□□□□□ -1.46
LHX1P48742 RNA5SP319-201ENST00000362768 119 ntBASIC5.96□□□□□ -1.46
LHX1P48742 RN7SKP160-201ENST00000363804 340 ntBASIC5.96□□□□□ -1.46
LHX1P48742 RN7SKP28-201ENST00000364770 305 ntBASIC5.96□□□□□ -1.46
LHX1P48742 RN7SKP6-201ENST00000364795 319 ntBASIC5.96□□□□□ -1.46
LHX1P48742 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.96□□□□□ -1.46
LHX1P48742 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.96□□□□□ -1.46
LHX1P48742 AC012075.1-201ENST00000436549 580 ntBASIC5.96□□□□□ -1.46
LHX1P48742 NANOGP9-201ENST00000439890 892 ntBASIC5.96□□□□□ -1.46
LHX1P48742 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 RNU6-751P-201ENST00000516382 101 ntBASIC5.96□□□□□ -1.46
LHX1P48742 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.96□□□□□ -1.46
LHX1P48742 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.96□□□□□ -1.46
LHX1P48742 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 AC007225.2-201ENST00000562529 256 ntBASIC5.96□□□□□ -1.46
LHX1P48742 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.96□□□□□ -1.46
LHX1P48742 AC012616.1-201ENST00000600294 197 ntBASIC5.96□□□□□ -1.46
LHX1P48742 AL713998.2-201ENST00000604538 1198 ntBASIC5.96□□□□□ -1.46
LHX1P48742 AC010245.2-201ENST00000606908 1167 ntBASIC5.96□□□□□ -1.46
LHX1P48742 SNORA35B-201ENST00000607417 129 ntBASIC5.96□□□□□ -1.46
LHX1P48742 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.96□□□□□ -1.46
LHX1P48742 MIR6886-201ENST00000619864 61 ntBASIC5.96□□□□□ -1.46
LHX1P48742 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.96□□□□□ -1.46
LHX1P48742 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.96□□□□□ -1.46
LHX1P48742 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LHX1P48742 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.96□□□□□ -1.46
LHX1P48742 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.95□□□□□ -1.46
LHX1P48742 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LHX1P48742 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.95□□□□□ -1.46
LHX1P48742 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 MT-RNR2-201ENST00000387347 1559 ntBASIC5.95□□□□□ -1.46
LHX1P48742 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.95□□□□□ -1.46
LHX1P48742 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 YY1P1-201ENST00000427625 668 ntBASIC5.95□□□□□ -1.46
LHX1P48742 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.95□□□□□ -1.46
LHX1P48742 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.95□□□□□ -1.46
LHX1P48742 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.95□□□□□ -1.46
LHX1P48742 AC019185.1-201ENST00000442718 389 ntBASIC5.95□□□□□ -1.46
LHX1P48742 SPRYD7P1-201ENST00000443861 570 ntBASIC5.95□□□□□ -1.46
LHX1P48742 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.95□□□□□ -1.46
LHX1P48742 AC093719.1-201ENST00000480427 441 ntBASIC5.95□□□□□ -1.46
LHX1P48742 EIF1P7-201ENST00000487533 337 ntBASIC5.95□□□□□ -1.46
LHX1P48742 AC108693.1-201ENST00000496068 432 ntBASIC5.95□□□□□ -1.46
LHX1P48742 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LHX1P48742 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.95□□□□□ -1.46
LHX1P48742 MIR3176-201ENST00000582210 90 ntBASIC5.95□□□□□ -1.46
LHX1P48742 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LHX1P48742 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.95□□□□□ -1.46
LHX1P48742 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LHX1P48742 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.95□□□□□ -1.46
LHX1P48742 AC079395.2-201ENST00000610982 737 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms