Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXC13P31276 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HOXC13P31276 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXC13P31276 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC027088.4-201ENST00000611559 1947 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC13P31276 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 RNA5SP394-201ENST00000364216 119 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC104297.1-201ENST00000393779 870 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 HMGB1P20-201ENST00000402555 677 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 NPM1P37-201ENST00000403105 874 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 RPS3AP2-201ENST00000407190 754 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 RPS4XP5-201ENST00000419038 768 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC13P31276 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 TRBV5-2-201ENST00000489095 273 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 TOMM22P4-201ENST00000511318 336 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC060766.1-201ENST00000590824 627 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC211433.2-201ENST00000608433 387 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC018445.2-201ENST00000622987 260 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 MTCO1P1-201ENST00000624263 1081 ntBASIC6.11□□□□□ -1.43
HOXC13P31276 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXC13P31276 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
HOXC13P31276 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXC13P31276 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXC13P31276 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC13P31276 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC13P31276 AC010329.1-201ENST00000593903 8328 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AL592429.1-201ENST00000403909 1473 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC13P31276 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 AL353625.1-202ENST00000366273 571 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 SNRPEP6-201ENST00000407465 277 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 CASKP1-201ENST00000412870 582 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 RPL35AP24-201ENST00000413846 330 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AL691447.1-201ENST00000419456 387 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 PTMAP6-201ENST00000439110 327 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 EEF1B2P6-201ENST00000445713 673 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AC073909.1-201ENST00000447112 999 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC13P31276 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC13P31276 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC13P31276 AL603882.1-201ENST00000463059 681 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 CYCSP22-201ENST00000517555 339 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 AC008676.3-201ENST00000521237 435 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC13P31276 AC091078.2-201ENST00000557145 559 ntBASIC6.1□□□□□ -1.43
HOXC13P31276 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC13P31276 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms