Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
MMP8P22894 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MMP8P22894 RNU6-925P-201ENST00000384629 104 ntBASIC6.12□□□□□ -1.43
MMP8P22894 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
MMP8P22894 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
MMP8P22894 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 AC098592.2-201ENST00000413158 265 ntBASIC6.12□□□□□ -1.43
MMP8P22894 VN1R31P-201ENST00000417498 730 ntBASIC6.12□□□□□ -1.43
MMP8P22894 VN1R21P-201ENST00000426703 765 ntBASIC6.12□□□□□ -1.43
MMP8P22894 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP8P22894 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 GAPDHP48-201ENST00000436626 961 ntBASIC6.12□□□□□ -1.43
MMP8P22894 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 AC110602.1-201ENST00000437414 318 ntBASIC6.12□□□□□ -1.43
MMP8P22894 AP002345.1-201ENST00000456493 928 ntBASIC6.12□□□□□ -1.43
MMP8P22894 RN7SL168P-201ENST00000463821 279 ntBASIC6.12□□□□□ -1.43
MMP8P22894 RPL37P23-201ENST00000492641 294 ntBASIC6.12□□□□□ -1.43
MMP8P22894 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 OR5H7P-201ENST00000514084 930 ntBASIC6.12□□□□□ -1.43
MMP8P22894 RNU6-889P-201ENST00000517189 103 ntBASIC6.12□□□□□ -1.43
MMP8P22894 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP8P22894 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP8P22894 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP8P22894 AC107958.1-201ENST00000556576 290 ntBASIC6.12□□□□□ -1.43
MMP8P22894 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 RPAP2P1-201ENST00000603626 1168 ntBASIC6.12□□□□□ -1.43
MMP8P22894 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP8P22894 AC079298.2-201ENST00000623885 459 ntBASIC6.12□□□□□ -1.43
MMP8P22894 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
MMP8P22894 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP8P22894 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP8P22894 AL132656.3-201ENST00000606384 1595 ntBASIC6.11□□□□□ -1.43
MMP8P22894 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 AC009501.3-201ENST00000605001 1352 ntBASIC6.11□□□□□ -1.43
MMP8P22894 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
MMP8P22894 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 TMSB4XP2-201ENST00000335179 210 ntBASIC6.11□□□□□ -1.43
MMP8P22894 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 AC004386.1-201ENST00000393214 761 ntBASIC6.11□□□□□ -1.43
MMP8P22894 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 MRPL53P1-201ENST00000414323 319 ntBASIC6.11□□□□□ -1.43
MMP8P22894 TRIM60P17-201ENST00000415181 719 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 MTCO1P45-201ENST00000431457 267 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AC242426.1-201ENST00000435270 960 ntBASIC6.11□□□□□ -1.43
MMP8P22894 RAB9AP5-201ENST00000437794 597 ntBASIC6.11□□□□□ -1.43
MMP8P22894 RAB9AP2-201ENST00000443911 597 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 RPL31P20-201ENST00000449593 360 ntBASIC6.11□□□□□ -1.43
MMP8P22894 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 AC018635.1-201ENST00000468292 1030 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AC108729.2-201ENST00000476543 840 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AC090058.1-201ENST00000498788 435 ntBASIC6.11□□□□□ -1.43
MMP8P22894 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 AC119751.4-201ENST00000507498 357 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AC108157.1-201ENST00000510511 539 ntBASIC6.11□□□□□ -1.43
MMP8P22894 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.11□□□□□ -1.43
MMP8P22894 RNU6-1102P-201ENST00000516149 96 ntBASIC6.11□□□□□ -1.43
MMP8P22894 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 IGLV3-30-201ENST00000524362 298 ntBASIC6.11□□□□□ -1.43
MMP8P22894 GTF2IP11-201ENST00000526931 420 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AP000648.1-201ENST00000529682 397 ntBASIC6.11□□□□□ -1.43
MMP8P22894 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.11□□□□□ -1.43
MMP8P22894 OR1AB1P-201ENST00000585564 761 ntBASIC6.11□□□□□ -1.43
MMP8P22894 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP8P22894 BNIP3P40-201ENST00000596017 556 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AL133247.2-201ENST00000603236 482 ntBASIC6.11□□□□□ -1.43
MMP8P22894 HMGB1P51-201ENST00000605166 638 ntBASIC6.11□□□□□ -1.43
MMP8P22894 HIRAP1-201ENST00000605318 787 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AL031601.1-201ENST00000605702 394 ntBASIC6.11□□□□□ -1.43
MMP8P22894 AC016957.2-201ENST00000616998 848 ntBASIC6.11□□□□□ -1.43
MMP8P22894 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP8P22894 AC018628.1-201ENST00000624147 3819 ntBASIC6.11□□□□□ -1.43
MMP8P22894 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP8P22894 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
MMP8P22894 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP8P22894 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms