Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RN7SL57P-201ENST00000493687 290 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH3P22223 ST13P12-201ENST00000508958 1094 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH3P22223 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 AC079600.1-201ENST00000550326 297 ntBASIC5.73□□□□□ -1.49
CDH3P22223 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 ZNF322P1-201ENST00000568013 1209 ntBASIC5.73□□□□□ -1.49
CDH3P22223 MIR132-201ENST00000591554 101 ntBASIC5.73□□□□□ -1.49
CDH3P22223 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH3P22223 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH3P22223 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 MYL6P5-201ENST00000412707 459 ntBASIC5.72□□□□□ -1.49
CDH3P22223 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 KIF4CP-201ENST00000422742 1279 ntBASIC5.72□□□□□ -1.49
CDH3P22223 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 AC099677.3-201ENST00000427081 395 ntBASIC5.72□□□□□ -1.49
CDH3P22223 TRGV7-201ENST00000427089 353 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC016027.5-201ENST00000427227 210 ntBASIC5.72□□□□□ -1.49
CDH3P22223 BX323845.3-201ENST00000428215 527 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 RPL12P18-201ENST00000437175 325 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH3P22223 RPL5P25-201ENST00000441148 775 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC073109.1-201ENST00000445066 978 ntBASIC5.72□□□□□ -1.49
CDH3P22223 RSL24D1P2-201ENST00000445584 366 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 AP006222.1-205ENST00000450734 457 ntBASIC5.72□□□□□ -1.49
CDH3P22223 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 AL035690.1-201ENST00000490892 383 ntBASIC5.72□□□□□ -1.49
CDH3P22223 OR52A4P-203ENST00000498233 1014 ntBASIC5.72□□□□□ -1.49
CDH3P22223 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 GAPDHP71-201ENST00000511530 1003 ntBASIC5.72□□□□□ -1.49
CDH3P22223 CYP4F27P-201ENST00000514557 494 ntBASIC5.72□□□□□ -1.49
CDH3P22223 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 SNORD46.2-201ENST00000516021 102 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC008429.4-201ENST00000521201 182 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH3P22223 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH3P22223 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH3P22223 AC135626.1-201ENST00000556983 435 ntBASIC5.72□□□□□ -1.49
CDH3P22223 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 AC009852.2-201ENST00000567898 485 ntBASIC5.72□□□□□ -1.49
CDH3P22223 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 COX6CP7-201ENST00000597056 208 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC004890.3-201ENST00000605566 1095 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AF117829.2-201ENST00000619538 361 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC026124.2-201ENST00000621847 656 ntBASIC5.72□□□□□ -1.49
CDH3P22223 OR8G3P-202ENST00000641572 1255 ntBASIC5.72□□□□□ -1.49
CDH3P22223 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 AC004076.2-201ENST00000620532 3323 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AC005005.4-201ENST00000623789 16698 ntBASIC5.72□□□□□ -1.49
CDH3P22223 AL022311.1-201ENST00000623726 19416 ntBASIC5.72□□□□□ -1.49
CDH3P22223 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
CDH3P22223 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH3P22223 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH3P22223 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CDH3P22223 MAPK10-328ENST00000641553 4009 ntBASIC5.71□□□□□ -1.49
CDH3P22223 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CDH3P22223 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDH3P22223 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CDH3P22223 PDZK1P1-202ENST00000425209 1350 ntBASIC5.71□□□□□ -1.5
CDH3P22223 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH3P22223 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms